G34183


Basic Information

Item Value
gene id G34183
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15751663 ~ 15752548 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU38745
CCTCCTTCTTAGGACAACTTTGAACTTTTTTGATCCACTTCAAATGTTGACTACTGTACATGTCCTGGTGTTTATTCCCTACACTATCAAAAAAAATTGTCCAAGATTTTTTCATATGTTTCTGCACTCTGTGAGATTTGAAGTCTGGTCTTTTGGTCTTTTTCGGGCACCATAGTCCAGGACCGTGCCCTCAAAGAGTCTGGCCATGAATGCCAGGCCATCAGCTTTGATGTAGGAGCGTCCGGCAAAGGTGTAGAGGATAGGATTGGCACAACTACTGATAAAAGCCAGAGCGGATGTAACCGCACGACTGGACTGCCAGATATGATCCAATCTTTTTTTGGTTGATCCATCTTGTATAAGTGCTGCCACCACTTGCACTACATTAATAATATGATAAGGAAGCCAAAAAATGCAGAATGCCACAATGATGGCTTGAATGAGGTTCTCGCTTCGTATCCTTCTCTTGAACATGGTCTGTCTGAGGCGGCGAAGGATACACGCATAACTGCTGACTATGATCACATACGGTACCAGGAAGCCCACCACTGTCTCAAGTGTGTACTGGAGTATCACCTGTTCATAATGACATCATGTATGAATTATGAAATTTTGTAAGGATATAATGCACAGTCAGCAGATCATTATCGAAAAATAGACATGAATCACTGGGAGTGGTTTATATTAATATAGTAATTCTCCTGCACTCTAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38745 True 715 lncRNA 0.42 3 15751663 15752548

Neighbor

gene id symbol gene type direction distance location
CI01000004_15711867_15722470 PARP2 coding upstream 29081 15711867 ~ 15722582 (+)
CI01000004_15694735_15698103 SDR39U1 coding upstream 53242 15694735 ~ 15698421 (+)
CI01000004_15687242_15691238 NA coding upstream 60386 15685262 ~ 15691277 (+)
CI01000004_15645965_15650241 NA coding upstream 101389 15645965 ~ 15650274 (+)
CI01000004_15631508_15632389 NA coding upstream 119260 15631430 ~ 15632403 (+)
CI01000004_15787382_15803133 NA coding downstream 34834 15787382 ~ 15803144 (+)
CI01000004_15825817_15827475 TEP1 coding downstream 73269 15825817 ~ 15827603 (+)
CI01000004_15859240_15861471 APOL1 coding downstream 106692 15859240 ~ 15863449 (+)
CI01000004_15867404_15875293 NA coding downstream 114437 15866985 ~ 15875304 (+)
CI01000004_15892502_15900203 DCAF8 coding downstream 137825 15890373 ~ 15900852 (+)
G34181 NA non-coding upstream 2737 15748649 ~ 15748926 (+)
G33803 NA non-coding upstream 40697 15622928 ~ 15710966 (+)
G33882 NA non-coding upstream 129343 15620079 ~ 15622320 (+)
G33834 NA non-coding upstream 157288 15586066 ~ 15594375 (+)
G34142 NA non-coding upstream 194879 15556405 ~ 15556784 (+)
G34186 NA non-coding downstream 3487 15756035 ~ 15756391 (+)
G34188 NA non-coding downstream 15204 15767752 ~ 15767991 (+)
G34192 NA non-coding downstream 23711 15776259 ~ 15776513 (+)
G34193 NA non-coding downstream 24242 15776790 ~ 15777008 (+)
G34194 NA non-coding downstream 24485 15777033 ~ 15777351 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other upstream 659694 15091200 ~ 15097173 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 1714763 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 3095952 12646838 ~ 12652570 (+)
G31865 NA other upstream 3556516 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 4084004 11666900 ~ 11667659 (+)
G34220 NA other downstream 186809 15939357 ~ 15939950 (+)
G33815 NA other downstream 310867 16063415 ~ 16066464 (+)
G34400 NA other downstream 1224780 16971995 ~ 17025976 (+)

Expression


Co-expression Network