CI01000004_16467711_16471121


Basic Information

Item Value
gene id CI01000004_16467711_16471121
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 16467711 ~ 16471507 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_16467711_16471121.mRNA
GTTAAGTTGTGGGAGTTGCAGAAGCAGGTCCTTGACATAATTGAAGCAAAAGAGAAAGACGTGCAAGAGCTGGGACAAGCTGTTGAGGTTTTCAGGAGCACTGTGTCTCTGCCCTCACTGACCAAGTATAAAAGATCATTCGTCTTCCTCGTGCATCCATACAATTCCTTTGAGCGTGACTCCATGGCAGTTAATGAACTGGTAGAGAAGCTAAACACGACCAGCAAGTCGAGTTTACTCACAATTTCCAGAAAAGTGAAAAACACTAGAATCGTAACATCACCACGACCGAAGACTCGAGAGGAGTTTCTAAAGTGGTGCACTCTTCCACTGTCCCAACAAATAGACCTACATGGTCTCTTTTTCTCCCTTAAACCAAACAAATGCAAATACTCACATACACTTGCATCATCTCATTGAGCAGATATATACCGAGGCCCGGAGGGTCGGTACAAGGGACAACACTAAACCCAGTTGCCTCCTGCCCTTCCCCCTGCTACCCACCCTTCCAAACACAGAATCAGCCTAGGGGTAAGTGTAGGGCAGACATGGTTTCAACAGAGAAAGCAATGCCAGAGCAACAGAGAAGCACAGGAAATGTGTGTACAGGGAAAAATAGGCACTAATAGAGAACATCACAGAGAGAAAGAGTGTGTGCCATAGTCCTCAGGGAGCTGCTTACAGTTCTGTCCAATAACAGATATCATTTGCTGCCTGTATTATCCTTTTATGAGTGACGGGGATTTTAAAATACTCTATTATGAAAGGAACCGTTTCTCTCACTTTCAGGACACTGACACTGGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_16467711_16471121.mRNA True 806 mRNA 0.45 4 16467711 16471507

Neighbor

gene id symbol gene type direction distance location
CI01000004_16407140_16438873 NA coding upstream 28461 16406985 ~ 16439250 (+)
CI01000004_16346680_16401924 NA coding upstream 65787 16346680 ~ 16401924 (+)
CI01000004_16221780_16232426 PSMB5 coding upstream 234771 16221780 ~ 16232940 (+)
CI01000004_16217935_16218580 NA coding upstream 249131 16217853 ~ 16218580 (+)
CI01000004_16138496_16143438 NA coding upstream 323594 16138496 ~ 16144117 (+)
CI01000004_16490931_16555397 CARMIL3, LRRC16B coding downstream 19424 16490931 ~ 16555993 (+)
CI01000004_16567132_16570668 NA coding downstream 95625 16567132 ~ 16571368 (+)
CI01000004_16579927_16586961 NA coding downstream 108420 16579927 ~ 16587197 (+)
CI01000004_16649360_16654303 NA coding downstream 177664 16649171 ~ 16654353 (+)
CI01000004_16695941_16729500 NA coding downstream 224126 16695633 ~ 16729719 (+)
G34323 NA non-coding upstream 12085 16449680 ~ 16455626 (+)
G34322 NA non-coding upstream 18621 16448846 ~ 16449090 (+)
G34297 NA non-coding upstream 158405 16301233 ~ 16309306 (+)
G34266 NA non-coding upstream 286862 16180508 ~ 16180849 (+)
G33830 NA non-coding upstream 306713 16158712 ~ 16160998 (+)
G34330 NA non-coding downstream 500 16472007 ~ 16472233 (+)
G34277 NA non-coding downstream 169835 16641342 ~ 16646222 (+)
G34357 NA non-coding downstream 194073 16665580 ~ 16672434 (+)
G34359 NA non-coding downstream 201037 16672544 ~ 16672767 (+)
G34361 NA non-coding downstream 202414 16673921 ~ 16674301 (+)
G33815 NA other upstream 401247 16063415 ~ 16066464 (+)
G34220 NA other upstream 527761 15939357 ~ 15939950 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other upstream 1375742 15091200 ~ 15097173 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 2430811 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 3812000 12646838 ~ 12652570 (+)
G34400 NA other downstream 505821 16971995 ~ 17025976 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location