G42956


Basic Information

Item Value
gene id G42956
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 5159344 ~ 5173432 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU63623
CTCAGCTGTGTGACATCACTGCTTGTCCACCTGTAGGAGACCCTTAGTTTTGACACTTCGCGTAATTCCGCCTCGATCGGGTTCGAAGTATCACTTCAGGTAACGTTGctctttgttttcctttttcgaTTCGCTTTTGGAAGAGGCCGGTGTTAGCAGGAGATGATGAAGAAGGGAATTGGGCAGTAATTGAGTCtcggtgtgtgtgagtgagtgagtgactgcgtgtgtgagtgtgtttgtgtgtgtgtgtgtgtgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63623 True 260 lncRNA 0.48 3 5159344 5173432

Neighbor

gene id symbol gene type direction distance location
marchf7 LOC107660063,LOC107705582,LOC107742244,LOC107677578 coding downstream 6417 5139374 ~ 5152927 (-)
LOC122347505 fam171b,LOC107742147,LOC107660062,LOC107584765,LOC107705581,LOC107555401 coding downstream 20711 5131256 ~ 5138633 (-)
gulp1b gulp1b,LOC107677600,LOC107741734,LOC107705580,LOC107660061 coding downstream 84265 5033954 ~ 5075079 (-)
pjvk dfnb59,LOC107555423,LOC107584822 coding downstream 150381 5005451 ~ 5008963 (-)
pcnt pcnt,LOC107555398,LOC107677569,LOC107660059,LOC107743407,LOC107584825,LOC107705497 coding downstream 167900 4956348 ~ 4991444 (-)
tanc1a tanc1,tanc1a,LOC107743188,LOC107688874,LOC107660065 coding upstream 73882 5247314 ~ 5309056 (-)
pkp4 pkp4,LOC107688875,LOC107705586,LOC107660066,LOC107709738 coding upstream 138192 5311624 ~ 5342802 (-)
c6h7orf57 LOC107688921,LOC107709739,LOC107555435,LOC107705587,LOC107660069 coding upstream 170879 5344311 ~ 5349557 (-)
gpd2 gpd2,LOC107709740,LOC107660071,LOC107705589,LOC107688873 coding upstream 201499 5374931 ~ 5399921 (-)
slc15a1b slc15a1b,LOC107660134,LOC107705529,LOC107584761,LOC107555411 coding upstream 260979 5434411 ~ 5443079 (-)
LOC122346990 NA non-coding downstream 277951 4867127 ~ 4881393 (-)
G42644 LOC101169590,LOC106917580,LOC108430882 non-coding downstream 454841 4698903 ~ 4704503 (-)
G42614 NA non-coding downstream 653677 4503734 ~ 4505667 (-)
G42615 NA non-coding downstream 656138 4502720 ~ 4503206 (-)
G42606 abi2 non-coding downstream 684552 4473919 ~ 4474792 (-)
LOC122346706 NA non-coding upstream 12169 5185601 ~ 5191999 (-)
LOC122346705 NA non-coding upstream 63389 5236821 ~ 5238695 (-)
G43019 NA non-coding upstream 480789 5654221 ~ 5654958 (-)
LOC122346635 NA non-coding upstream 572007 5745439 ~ 5747394 (-)
LOC122346634 fmnl2,fmnl2a,LOC108273365,LOC108443439 non-coding upstream 574334 5747766 ~ 5755464 (-)
sumo3a sumo3a,sumo3b,LOC103392195,LOC107668404,LOC108430868 other downstream 272995 4882787 ~ 4886349 (-)
LOC122347558 cycsb,LOC103040542,LOC108273362,LOC108430847 other downstream 333878 4818191 ~ 4825466 (-)
gpr155b gpr155b,LOC107740589,LOC107581372,LOC107584777,LOC107705544,LOC107677583,LOC107660045 other downstream 384798 4766381 ~ 4774546 (-)
dnah9l dnah11,LOC107581427,LOC107677540,LOC108430841,LOC108272446,LOC103372266,LOC104955736,LOC107740597,LOC102781332,LOC107384434 other downstream 420802 4709290 ~ 4738542 (-)
nudt15 LOC107584789,LOC107705561,LOC107706649,LOC107677555,LOC107660035,LOC107581358 other downstream 661926 4493912 ~ 4497418 (-)
G42958 LOC107742327 other upstream 56024 5229456 ~ 5230710 (-)
adam23a adam23,adam23a,LOC107748557,LOC107705602,LOC107660086,LOC107688856 other upstream 449254 5622686 ~ 5639926 (-)
arl6ip6 LOC107688850,LOC107748576,LOC107705609,LOC107660093,LOC107566311,LOC107555419 other upstream 518049 5691481 ~ 5699650 (-)
mylkb mylkb,LOC107688847,LOC107748549,LOC107555454,LOC107705608,LOC107566310,LOC107660138 other upstream 550036 5723468 ~ 5736620 (-)
desmb desmb,LOC107566324,LOC107660100,LOC107705613,LOC107688844,LOC107566784,LOC107748575 other upstream 785361 5958793 ~ 5966604 (-)

Expression


Co-expression Network