vstm2l


Basic Information

Item Value
gene id vstm2l
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 628877 ~ 637760 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241206.1
GCCGCAGCCGCACGGCAATTAGTGCGCTCCGGTGCGTGACGAGCACAGACACCGACCGACTCTCGGGCGCCGCTTTACCGGCAGGATCTGATGAGCGACAGAGCACAAATGCGCTCGTTTGGAGAGATGCTGTGGATTATACACTCGGTGGGACTTTATGCCCAAATCAGCGCGAATTTGGCGGTGGACAATCACGTATCTGGAAACGGTAGGTGTGTGCGAGGAACGGAAACAAGCGGAACGGCACTTAGTTGAGTGTGATGGGATGCGTCTCGAGCTTTTCTGGAGCATCATATATGAACTGATTCAGATCACCCAAAAACCCTGCCTGGcTCTCTTCACCGAGGTTCCTCAGGACGTGGTCTCTCAGGCTGGAGATGATGTGGAGATGGCCTGCTCCTTCAGGGGTGCTAGCTCCTCCTCCGTCTCCTTGGAGATCCAGTGGTGGTACACCAGAAACAGCAGAGACTGGGCGGAGCCACCAGCATGGACAGCCAATCAGGTGGTTTCCGAGGAAAACACACCAAAGGGAGCGACTAAAATAAGTGTGGTAAAAGTGGTTGGCAGCAACATCTCACATAAGCTTCGCCTGTCTAGCGTCAGACCATCAGACGAGGGAACCTACGAGTGTCGAGTCATTGACTTCAGTGAAAGCCGAGTCCAGCGCCACAGAGTCCAGGCTTATCTGCAGGTCCATCCGGACGGCCAGCAGGAACACCGGAGTCCCGTCCACAGCACAGAGGACGAAAAGAAGGCGTCAGAGCGGAGTCCTGAAGATCTACACAAGAGCCATCATAACAGAGAAGAAGAGCAGAGAACGCAGGAAGTGGCCCGTCGGTTTCACGAAGAGGATCCTCATCAGCTCCTTGAGGAGAACAAGACAAGAATGGGAGAGAAACACCCGTCAGAGAGCAGAGATCTGAAAACAGAGTGACTGAAAAGAAGAGGGCCGTCTCGATAAAACTAGAACAGTCCTGAAGTTACGAACGCAAGCTGTCCACATAAGTATACTTAACATTAGTTTTATTGCGAGCTCAAATTGTTCTGATTTGCGCTATAAAAACGAAGATTTAGACAGATGGTTTATTCAAGCTACTTAGAAAGCTTTTGCAATCGAACCTATTTACTTTTGGAACCATTTCTGTTGGCTAGTCTTCTTAAAAACATTAGGCGATCAGCAAAACTTTAGTTTTCTTTGTGTTGGTTTGACTCTTGATTCTTCTCGTCGTGTGGTCATCGAAAGAGAGGACAggaattgaatgaataaaactgcAGCAGAAACGAGAGGTGATTATTAATGACCGAGAAGAAACGAAGAGGGTGCATTTGGCTGCGCTGCGGGGCGAAagagaaatgttaatttattcattagaaAGGAAGGACAAACAAGGACtgaatgtaatatattgtttatgtcGGTGATGTTTACTGATCTATTCTCctgcacattttatttgtgaGTTTCATTTGTTAAGTGGTTATCAAAAAATGGATTGTACACAAGATGGTAAAcggctagtgtgtgtgtgtgtgtgtgtgttttataagacTTTGAAATAGAGCTACATTTCTAAATGGGCTTTTCTATTAATGTTGAACAGATATTCTGCCGTTTTCTGATGTTAAAGTGATTTTAATGACGCATCTTCTGTACGTCTGCCTTGTTCTGCTTTAGTGTTCTGTATGGAGGCAAATGCTTCAGTTATGTAACTTTATTGCATTTCTGAAGAAAGTGTCCCttgtttcaatttaaaaagtCCTATTAAAccctaataaaataattgcgCACATTCTA
>XM_043241207.1
CAGCCGCACGGCAATTAGTGCGCTCCGGTGCGTGACGAGCACAGACACCGACCGACTCTCGGGCGCCGCTTTACCGGCAGGATCTGATGAGCGACAGAGCACAAATGCGCTCGTTTGGAGAGATGCTGTGGATTATACACTCGGTGGGACTTTATGCCCAAATCAGCGCGAATTTGGCGGTGGACAATCACGTATCTGGAAACGcTCTCTTCACCGAGGTTCCTCAGGACGTGGTCTCTCAGGCTGGAGATGATGTGGAGATGGCCTGCTCCTTCAGGGGTGCTAGCTCCTCCTCCGTCTCCTTGGAGATCCAGTGGTGGTACACCAGAAACAGCAGAGACTGGGCGGAGCCACCAGCATGGACAGCCAATCAGGTGGTTTCCGAGGAAAACACACCAAAGGGAGCGACTAAAATAAGTGTGGTAAAAGTGGTTGGCAGCAACATCTCACATAAGCTTCGCCTGTCTAGCGTCAGACCATCAGACGAGGGAACCTACGAGTGTCGAGTCATTGACTTCAGTGAAAGCCGAGTCCAGCGCCACAGAGTCCAGGCTTATCTGCAGGTCCATCCGGACGGCCAGCAGGAACACCGGAGTCCCGTCCACAGCACAGAGGACGAAAAGAAGGCGTCAGAGCGGAGTCCTGAAGATCTACACAAGAGCCATCATAACAGAGAAGAAGAGCAGAGAACGCAGGAAGTGGCCCGTCGGTTTCACGAAGAGGATCCTCATCAGCTCCTTGAGGAGAACAAGACAAGAATGGGAGAGAAACACCCGTCAGAGAGCAGAGATCTGAAAACAGAGTGACTGAAAAGAAGAGGGCCGTCTCGATAAAACTAGAACAGTCCTGAAGTTACGAACGCAAGCTGTCCACATAAGTATACTTAACATTAGTTTTATTGCGAGCTCAAATTGTTCTGATTTGCGCTATAAAAACGAAGATTTAGACAGATGGTTTATTCAAGCTACTTAGAAAGCTTTTGCAATCGAACCTATTTACTTTTGGAACCATTTCTGTTGGCTAGTCTTCTTAAAAACATTAGGCGATCAGCAAAACTTTAGTTTTCTTTGTGTTGGTTTGACTCTTGATTCTTCTCGTCGTGTGGTCATCGAAAGAGAGGACAggaattgaatgaataaaactgcAGCAGAAACGAGAGGTGATTATTAATGACCGAGAAGAAACGAAGAGGGTGCATTTGGCTGCGCTGCGGGGCGAAagagaaatgttaatttattcattagaaAGGAAGGACAAACAAGGACtgaatgtaatatattgtttatgtcGGTGATGTTTACTGATCTATTCTCctgcacattttatttgtgaGTTTCATTTGTTAAGTGGTTATCAAAAAATGGATTGTACACAAGATGGTAAAcggctagtgtgtgtgtgtgtgtgtgtgttttataagacTTTGAAATAGAGCTACATTTCTAAATGGGCTTTTCTATTAATGTTGAACAGATATTCTGCCGTTTTCTGATGTTAAAGTGATTTTAATGACGCATCTTCTGTACGTCTGCCTTGTTCTGCTTTAGTGTTCTGTATGGAGGCAAATGCTTCAGTTATGTAACTTTATTGCATTTCTGAAGAAAGTGTCCCttgtttcaatttaaaaagtCCTATTAAAccctaataaaataattgcgCACATTCTA

Function

NR:

description
PREDICTED: V-set and transmembrane domain-containing protein 2-like protein

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241206.1 True 1795 mRNA 0.46 4 628877 637760
XM_043241207.1 False 1667 mRNA 0.45 4 628877 637756

Neighbor

gene id symbol gene type direction distance location
dlgap4b dlgap4b,LOC107752864,LOC107705865,LOC107582307,LOC107554879,LOC108427631,LOC107690825 coding downstream 74705 461935 ~ 554172 (-)
LOC122346944 LOC107666693,LOC107752858,LOC107582308,LOC107705866 coding downstream 168604 453003 ~ 460273 (-)
zgc:123305 LOC107666669,LOC107554876,LOC107705891,LOC107752863,LOC107690826 coding downstream 186097 431740 ~ 442780 (-)
trim107 LOC107752857,LOC107666696,LOC107666695,LOC107666697,LOC107705892,LOC107690827,LOC107582338,LOC107554858 coding downstream 198319 427056 ~ 430558 (-)
tpra1 tpra1,LOC107666698,LOC107690818 coding downstream 202184 414895 ~ 426693 (-)
LOC122347424 LOC107582312,LOC107752866,LOC107554861 coding upstream 10832 648592 ~ 656610 (-)
LOC122346747 LOC107554861 coding upstream 21657 659417 ~ 665354 (-)
LOC122347422 LOC107690823,LOC107554861 coding upstream 32981 670741 ~ 677943 (-)
pxmp4 pxmp4,LOC103464829 coding upstream 42046 679806 ~ 682924 (-)
prkag1 prkag1,LOC107582314,LOC107686771,LOC107554882,LOC107752861,LOC107708574 coding upstream 63974 701734 ~ 708124 (-)
G41490 NA non-coding downstream 15140 611972 ~ 613737 (-)
G41478 NA non-coding downstream 61073 513802 ~ 567804 (-)
LOC122347556 NA non-coding downstream 417830 208054 ~ 211047 (-)
G41455 NA non-coding downstream 549436 77927 ~ 79441 (-)
G41530 pbx1,LOC107383950 non-coding upstream 139655 777415 ~ 833159 (-)
G41563 szt2,LOC107690821,LOC107582345,LOC107718365 non-coding upstream 269288 907048 ~ 908023 (-)
G41580 NA non-coding upstream 387242 1025002 ~ 1025752 (-)
G41582 NA non-coding upstream 444999 1082759 ~ 1083148 (-)
G41583 NA non-coding upstream 446038 1083798 ~ 1084177 (-)
G41443 NA other downstream 215324 225710 ~ 413553 (-)
LOC122346746 plxna1b,plxna1,LOC107582336,LOC102795829 other downstream 234533 389416 ~ 394344 (-)
LOC122346743 dlgap1a,dlgap1,LOC107686064,LOC107550721,LOC107584464,LOC107752864,LOC107690825,LOC107554879,LOC107582307,LOC107705865 other downstream 449744 158596 ~ 179133 (-)
G41781 NA other upstream 1065073 1702833 ~ 1707408 (-)
G41955 LOC107735028,LOC107705557,LOC108430057 other upstream 2202902 2840662 ~ 2843258 (-)
cep170ab cep170l,LOC107581301,LOC107678228,LOC107672679,LOC107567737,LOC107753897 other upstream 2454780 3092540 ~ 3107938 (-)
cep20 fopnl,LOC107706683,LOC107713084 other upstream 3314768 3952528 ~ 3954331 (-)
G42351 NA other upstream 3320607 3958367 ~ 3961542 (-)

Expression


Co-expression Network