prkag1 (prkag1,LOC107582314,LOC107686771,LOC107554882,LOC107752861,LOC107708574)


Basic Information

Item Value
gene id prkag1
gene name prkag1,LOC107582314,LOC107686771,LOC107554882,LOC107752861,LOC107708574
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 701734 ~ 708124 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241444.1
TCCGCGGCGGTCTTCCTCATCCTTGAAGGAGTCTATCGGCGAGCGGCGGGACCTGAACCGAAATACATATCATTTCAGCTCCCGGATACCGAACTAAAGTACATTTCTGCGCTCTGATCTCGAAGTAGACGTCTTGAGCTTCTTCACGCCGTGAATGGATCATGGAGTGTGTTCCTGCTGTTCTAGATGAGTTGGACGGTAAAAAGGAGGCGCACATAGAGGATCCTGAGTATAATGTCTACACCCGCTTTATGAAGTCCCACCGCTGCTACGACCTGGTGCCCACCAGCTCAAAGTTAGTGGTATTTGACACGTCTCTACAGGTGAAGAAGGCGTTCTTTGCTTTAGTGTCTAACGGAGTGAGAGCAGCGCCTCTCTGGGACAGCAAGAAACAATGCTTTGTTGGTATGCTGACCATCACAGATTTCATCAATATACTTCATCGCTATTACAAGTCTCCTCTGGTCCAGATCTATGAATTAGAAGAGCACAAAATAGAAACATGGCGAGAGGTCTACTTGCAAGACTCCTTCAAACCTCTCGTCAGCATATCTCCCAATGCCAGtctatATGATGCTGTCTCATCTCTGCTGAAGCATAAGATCCACAGATTGCCCGTCATTGATCCTCTAACAGGAAACACGCTCTACATCCTGACCCACAAGAGGATCCTCAAATTCCTGAAGCTCTTCaAACGCACTCTTGGTGCTTATGTTAACGATCTCTCGCAGATATCCGAGATGCCCAAGCCTGCGTTTCTGTCTCAAAcgctggaggagctgaacatcGGGACGTTTCACAACATCGCCGTGGTTCACTCGGATACGCCGCTCTACGCCGCCCTCGGCATCTTCGTGGATCAGAGAGTGTCTGCTCTTCCCGTGGTGGATGAAAACGGACGGGTGGTCGACATCTACTCCAAGTTTGATGTTATAAATCTGGCCGCTGAGAAGACGTACAACAACCTGGACATCACTGTGACTAAAGCCCTCCAGCATCGCTCGCAGTACTTTGAGGGAGTGCTCACCTGCCGAGCCAATGAGACGCTAGAGGCCATTATCAACCGGCTGGTGGAGGCTGAGGTTCACAGGTTGGTGATCGTGGATGAGCAGGAGGTGGTGAAAGGCATCGTGTCTCTGTCTGATATCCTACAGGCGCTGGTGCTCACCAACGGAGACGACGGAAGTGCTTGATGGAAGTGAAGCAGAACGTCTCTGTATTTCCTCTTCTCTCAATAAGCCACAAGCAGTTCCAGAAAAAGGATTGACGGCACACAGCCATCCCAAACACAGGAGACAATAAAAGCACAACCGACTCCAGAGCGAAGGAAGAGAcgtgctggaaaaaaaaaaaaaaaacattgctctTCGATGAACTAACTCTTTGAATCAGAGCCTCCGAACCGCTTCAGGGAGTCTACGAGGAAATTCTATCGCTTCAATTGGACCGGattcaaatgattttaattatgaCACCGTTTTTGCACGTTCATGTTACTTCCCTCACAGGAGGACGACAGATGAGGTTTTTGTGCAGACCCAGAGTACGGACTGAAACATTGTGTTATTGATCCGGACGCGGTTTTGCAGGgtaaccgttttttttttctctcacgaGGGCATTCGATATTGAAGAGGTCCTCTGAATCAGTCCGTTTCCACACACTGATTCGGTCACTCCAGCAGAATTCAGAGGAAGCTTCTCTGAACATCAAACCGGAGCCAACTTCCTTCATAATGTGAACATGGAGTGCTTtgctcaaatgtttttaaattaaccaTCGAATATTTATAGCATTAGAAAAGCAATTACGGATTGATAACATCATCATGTATTTTTAGTCCATCATCAGAtcagctttcttttctttttccctgtTGTTTTGGGCCGGACAGACAATTCTATGTGTTTTACTTCTAGTTGCTGCTGATTTTATTCTGCTTGAGTTGTTTTCAGAGCTCAATGGCTTTTATCAGTGCTTTGACGTGACGAGGAAGTGTTTTCAGAAGCCGTCAGCTGTGCATTATGGGTAAATCAAGATGTCATTTCAATTAGATACGCTTCCACAATTAGCTGGTGAtgtaatttgacaaaaatatcacaGGGTCCAACGGCTAAAgtgcttgtttttcatttttgtaaccCATCACAAACATCAACTcgcacttctttctttttattgtagCTCGTTTTGCTATGAAAAGATCATTccatcattttattgtattatattttgctgCCGTTTTTctctttagtcatttttattccaCATCTGTAAATACATCTGAACTGTTTTCTAATTCTCACGTCGAAGATGTTTTATTCGAGgcacaagcaaataaaaatctattcagTTTA
>XM_043241445.1
GCGGCGGTCTTCCTCATCCTTGAAGGAGTCTATCGGCGAGCGGCGGGACCTGAACCGAAATACATATCATTTCAGCTCCCGGATACCGAACTAAAGTACATTTCTGCGCTCTGATCTCGAAGTAGACGTCTTGAGCTTCTTCACGCCGTGAATGGATCATGGAGTGTGTTCCTGCTGTTCTAGATGAGTTGGACGGTAAAAAGGAGGCGCACATAGAGGATCCTGAGTATAATGTCTACACCCGCTTTATGAAGTCCCACCGCTGCTACGACCTGGTGCCCACCAGCTCAAAGTTAGTGGTATTTGACACGTCTCTACAGGTGAAGAAGGCGTTCTTTGCTTTAGTGTCTAACGGAGTGAGAGCAGCGCCTCTCTGGGACAGCAAGAAACAATGCTTTGTTGGTATGCTGACCATCACAGATTTCATCAATATACTTCATCGCTATTACAAGTCTCCTCTGGTCCAGATCTATGAATTAGAAGAGCACAAAATAGAAACATGGCGAGAGGTCTACTTGCAAGACTCCTTCAAACCTCTCGTCAGCATATCTCCCAATGCCAGtctatATGATGCTGTCTCATCTCTGCTGAAGCATAAGATCCACAGATTGCCCGTCATTGATCCTCTAACAGGAAACACGCTCTACATCCTGACCCACAAGAGGATCCTCAAATTCCTGAAGCTCTTCATATCCGAGATGCCCAAGCCTGCGTTTCTGTCTCAAAcgctggaggagctgaacatcGGGACGTTTCACAACATCGCCGTGGTTCACTCGGATACGCCGCTCTACGCCGCCCTCGGCATCTTCGTGGATCAGAGAGTGTCTGCTCTTCCCGTGGTGGATGAAAACGGACGGGTGGTCGACATCTACTCCAAGTTTGATGTTATAAATCTGGCCGCTGAGAAGACGTACAACAACCTGGACATCACTGTGACTAAAGCCCTCCAGCATCGCTCGCAGTACTTTGAGGGAGTGCTCACCTGCCGAGCCAATGAGACGCTAGAGGCCATTATCAACCGGCTGGTGGAGGCTGAGGTTCACAGGTTGGTGATCGTGGATGAGCAGGAGGTGGTGAAAGGCATCGTGTCTCTGTCTGATATCCTACAGGCGCTGGTGCTCACCAACGGAGACGACGGAAGTGCTTGATGGAAGTGAAGCAGAACGTCTCTGTATTTCCTCTTCTCTCAATAAGCCACAAGCAGTTCCAGAAAAAGGATTGACGGCACACAGCCATCCCAAACACAGGAGACAATAAAAGCACAACCGACTCCAGAGCGAAGGAAGAGAcgtgctggaaaaaaaaaaaaaaaacattgctctTCGATGAACTAACTCTTTGAATCAGAGCCTCCGAACCGCTTCAGGGAGTCTACGAGGAAATTCTATCGCTTCAATTGGACCGGattcaaatgattttaattatgaCACCGTTTTTGCACGTTCATGTTACTTCCCTCACAGGAGGACGACAGATGAGGTTTTTGTGCAGACCCAGAGTACGGACTGAAACATTGTGTTATTGATCCGGACGCGGTTTTGCAGGgtaaccgttttttttttctctcacgaGGGCATTCGATATTGAAGAGGTCCTCTGAATCAGTCCGTTTCCACACACTGATTCGGTCACTCCAGCAGAATTCAGAGGAAGCTTCTCTGAACATCAAACCGGAGCCAACTTCCTTCATAATGTGAACATGGAGTGCTTtgctcaaatgtttttaaattaaccaTCGAATATTTATAGCATTAGAAAAGCAATTACGGATTGATAACATCATCATGTATTTTTAGTCCATCATCAGAtcagctttcttttctttttccctgtTGTTTTGGGCCGGACAGACAATTCTATGTGTTTTACTTCTAGTTGCTGCTGATTTTATTCTGCTTGAGTTGTTTTCAGAGCTCAATGGCTTTTATCAGTGCTTTGACGTGACGAGGAAGTGTTTTCAGAAGCCGTCAGCTGTGCATTATGGGTAAATCAAGATGTCATTTCAATTAGATACGCTTCCACAATTAGCTGGTGAtgtaatttgacaaaaatatcacaGGGTCCAACGGCTAAAgtgcttgtttttcatttttgtaaccCATCACAAACATCAACTcgcacttctttctttttattgtagCTCGTTTTGCTATGAAAAGATCATTccatcattttattgtattatattttgctgCCGTTTTTctctttagtcatttttattccaCATCTGTAAATACATCTGAACTGTTTTCTAATTCTCACGTCGAAGATGTTTTATTCGAGgcacaagcaaataaaaatctattcagTTTA

Function

symbol description
prkag1 Predicted to enable AMP binding activity; protein kinase binding activity; and protein kinase regulator activity. Predicted to be involved in cellular response to glucose starvation; protein phosphorylation; and regulation of catalytic activity. Predicted to act upstream of or within phosphorylation and regulation of protein serine/threonine kinase activity. Predicted to be part of nucleotide-activated protein kinase complex. Predicted to be active in cytoplasm and nucleus. Orthologous to human PRKAG1 (protein kinase AMP-activated non-catalytic subunit gamma 1).

NR:

description
PREDICTED: 5'-AMP-activated protein kinase subunit gamma-1

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0030554 adenyl nucleotide binding molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
K07200 PRKAG; 5'-AMP-activated protein kinase, regulatory gamma subunit

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241444.1 True 2358 mRNA 0.45 13 701734 708124
XM_043241445.1 False 2316 mRNA 0.45 13 701734 708121

Neighbor

gene id symbol gene type direction distance location
pxmp4 pxmp4,LOC103464829 coding downstream 18810 679806 ~ 682924 (-)
LOC122347422 LOC107690823,LOC107554861 coding downstream 23791 670741 ~ 677943 (-)
LOC122346747 LOC107554861 coding downstream 36380 659417 ~ 665354 (-)
LOC122347424 LOC107582312,LOC107752866,LOC107554861 coding downstream 45124 648592 ~ 656610 (-)
vstm2l NA coding downstream 63974 628877 ~ 637760 (-)
med8 med8,LOC107708572,LOC107554872,LOC107690829 coding upstream 147583 855707 ~ 857474 (-)
hyi hyi coding upstream 232166 940290 ~ 946313 (-)
lrrc41 lrrc41,LOC107746605,LOC107722283 coding upstream 828326 1536450 ~ 1542166 (-)
LOC122346936 uqcrh,LOC107672656,LOC106613551 coding upstream 834182 1542306 ~ 1544027 (-)
dmbx1b dmbx1,dmbx1b,LOC107672661,LOC107554873,LOC107746634 coding upstream 852703 1560827 ~ 1566465 (-)
G41490 NA non-coding downstream 87997 611972 ~ 613737 (-)
G41478 NA non-coding downstream 133930 513802 ~ 567804 (-)
LOC122347556 NA non-coding downstream 490687 208054 ~ 211047 (-)
G41455 NA non-coding downstream 622293 77927 ~ 79441 (-)
G41530 pbx1,LOC107383950 non-coding upstream 69291 777415 ~ 833159 (-)
G41563 szt2,LOC107690821,LOC107582345,LOC107718365 non-coding upstream 198924 907048 ~ 908023 (-)
G41580 NA non-coding upstream 316878 1025002 ~ 1025752 (-)
G41582 NA non-coding upstream 374635 1082759 ~ 1083148 (-)
G41583 NA non-coding upstream 375674 1083798 ~ 1084177 (-)
G41443 NA other downstream 288181 225710 ~ 413553 (-)
LOC122346746 plxna1b,plxna1,LOC107582336,LOC102795829 other downstream 307390 389416 ~ 394344 (-)
LOC122346743 dlgap1a,dlgap1,LOC107686064,LOC107550721,LOC107584464,LOC107752864,LOC107690825,LOC107554879,LOC107582307,LOC107705865 other downstream 522601 158596 ~ 179133 (-)
G41781 NA other upstream 994709 1702833 ~ 1707408 (-)
G41955 LOC107735028,LOC107705557,LOC108430057 other upstream 2132538 2840662 ~ 2843258 (-)
cep170ab cep170l,LOC107581301,LOC107678228,LOC107672679,LOC107567737,LOC107753897 other upstream 2384416 3092540 ~ 3107938 (-)
cep20 fopnl,LOC107706683,LOC107713084 other upstream 3244404 3952528 ~ 3954331 (-)
G42351 NA other upstream 3250243 3958367 ~ 3961542 (-)

Expression


Co-expression Network