LOC122346744


Basic Information

Item Value
gene id LOC122346744
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 225686 ~ 228558 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241596.1
AAAtagaactacatttcccatctgcGTTTGGCGAGTCACGTGATGCGCGATAACCGTAATAGCGTGTCTGATGATTTTATCCGCACGCAGCGGGACGCAGTGACCCTGAAGTGAATCGGGGTGATTTTATTTCTCTTGTTGGAGCGTTTGGGGTGATTTGGGGCTGATGGGGGCCGCGGACAGCAGGAGCAGGTCTGTGTCGTACGGACTCGACGAACAGGACAATGTCACGGTTATACACGGAGTAAAGTTGTCCGGAGATGTTCTTCAGCGGATGCGAGAGTCTggaccatcatcatcatcatcatcatcatcactcaAAGCAGAGAGCACCAAACCTGAACCAGGGCCGTCCAGACCGTCCTCCACAGAGACCAGGAGGAGCTCAGAAGACGGTTCGAGCGCGAGCAGGCTCTGGTCCAGGAAGAGTTGGCCCGGATCAGCcgtagagagagagatatcagGAGACGATATAAAGACACGGCAGGAAGTAGACAAAACACACAACCTgTGTGAAAGAACAGGAAAGCAGTGTGTGATTGTGCTCCAGTCCTTCAGATGGGCAGAGAGGAGATCTTTCTGTAACGTTTCCTCATCACGGTGTTGTTTCTTCTCTCGGTGCTTTCTCAGCGGATGA

Function

GO:

id name namespace
GO:0046982 protein heterodimerization activity molecular_function
GO:0046983 protein dimerization activity molecular_function

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04714 Thermogenesis
ko05203 Viral carcinogenesis
ko05322 Systemic lupus erythematosus
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05016 Huntington disease
ko05034 Alcoholism

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241596.1 True 637 mRNA 0.52 5 225686 228558

Neighbor

gene id symbol gene type direction distance location
LOC122347555 plxna1b,plxna1,LOC107752862,LOC107705867,LOC107582336,LOC107666668 coding downstream 6426 212264 ~ 219260 (-)
LOC122347266 vdra,LOC107565314,LOC107702164,LOC107701250,LOC103045919 coding downstream 174777 14369 ~ 50909 (-)
lmnl3 LOC107570199,LOC107702161 coding downstream 219922 7 ~ 5764 (-)
plxna1b plxna1b,plxna1,LOC107582336 coding upstream 31497 260055 ~ 369102 (-)
chchd6b LOC107666715,LOC107752855,LOC107582306 coding upstream 170684 399242 ~ 413744 (-)
tpra1 tpra1,LOC107666698,LOC107690818 coding upstream 186337 414895 ~ 426693 (-)
trim107 LOC107752857,LOC107666696,LOC107666695,LOC107666697,LOC107705892,LOC107690827,LOC107582338,LOC107554858 coding upstream 198498 427056 ~ 430558 (-)
zgc:123305 LOC107666669,LOC107554876,LOC107705891,LOC107752863,LOC107690826 coding upstream 203182 431740 ~ 442780 (-)
LOC122347556 NA non-coding downstream 14639 208054 ~ 211047 (-)
G41455 NA non-coding downstream 146245 77927 ~ 79441 (-)
G41478 NA non-coding upstream 285244 513802 ~ 567804 (-)
G41490 NA non-coding upstream 383414 611972 ~ 613737 (-)
G41530 pbx1,LOC107383950 non-coding upstream 548857 777415 ~ 833159 (-)
G41563 szt2,LOC107690821,LOC107582345,LOC107718365 non-coding upstream 678490 907048 ~ 908023 (-)
G41580 NA non-coding upstream 796444 1025002 ~ 1025752 (-)
LOC122346743 dlgap1a,dlgap1,LOC107686064,LOC107550721,LOC107584464,LOC107752864,LOC107690825,LOC107554879,LOC107582307,LOC107705865 other downstream 46553 158596 ~ 179133 (-)
LOC122346746 plxna1b,plxna1,LOC107582336,LOC102795829 other upstream 160858 389416 ~ 394344 (-)
G41781 NA other upstream 1474275 1702833 ~ 1707408 (-)
G41955 LOC107735028,LOC107705557,LOC108430057 other upstream 2612104 2840662 ~ 2843258 (-)
cep170ab cep170l,LOC107581301,LOC107678228,LOC107672679,LOC107567737,LOC107753897 other upstream 2863982 3092540 ~ 3107938 (-)
cep20 fopnl,LOC107706683,LOC107713084 other upstream 3723970 3952528 ~ 3954331 (-)

Expression


Co-expression Network