pttg1ipa (pttg1ipa,LOC107677570,LOC107740579,LOC107660056,LOC107581447)


Basic Information

Item Value
gene id pttg1ipa
gene name pttg1ipa,LOC107677570,LOC107740579,LOC107660056,LOC107581447
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 4887539 ~ 4891669 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241939.1
ACACCAAACCACGCCCTCACCGACGCAGGTATTGTAATTTAAGCTCCCGAAGGATGTTGAACGCCATGAAAGAGAACAAAACTACAAAACCTGTTGGTTTCTAGTCGGAGGAAGTGTGTGGTGCGAGGTTTAGAAGGGAGATACTCACAAAACCGATAAATTATCCAAGGAGTCTGCTTTATTTAGGTATTCGTTagtttaaagcagaaaacatgcattttgtaccTCTCGTCCTGATTGTCTTCGGTTTGAGCTCAACGCTGGCACAGAATACATCAGCTCCAaatacacaacaacaacaacaacaacaaacaacacagTCTTCAACTACGACAACACAAACTACTACAAGCAAAGCGCCGACTACAACACCACGTCCAAGTTGTGAGAGCAAGAATGGTACAAGCTGCGAGGAATGCTTGGCATATGTGGATtGTCTGTGGTGCATTCCAACTAAAACATGTGTAACATACCCAGCCAAAACCATCCTGCCCCCCCATTCCCTCTGCCCACTGAGTGATGCTCGATGGGGCCTTTGCACACtAAACTTCCAGATTTTGATCATTACATTGTCAGTGGTTGGAGCGATGCTCATCATTGGTTTTTTGGTGTGTATATTCTGCTGCTGCAAGTGTGAGAACATTGGATCTGCACGATTTGAAAACAGGATGAACCGGCAATCagacaagagaaaaacaaaacaagagcagagaaaaactGAGTTGAAAATTAGACATGATGAGATCCGACAAAAATATGGTCTCAGCAGGGCAAGTCCTTATGCCAGATTTGACAATCCCAGCTAAATGATGGGTGCACTGTTTTTAAGATCAATACTTTGACTGTATGCTGCCTATTTGAAGATTATTCAAATCAAGTAAATACTAAGATTCCACtgaactcaaaataataatcttctctttaaataaaattcagatGATTGTCATTTCTGTTCTGTCTATTCAGTCGGTGTAACCCTTAACCTCCCACTATTAtaagtaacttttaaaaaaaaaaattgtattaaaaatagttctcactgaaacaataatattaataaaacaatataatta

Function

symbol description
pttg1ipa Predicted to be involved in protein import into nucleus. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and nucleus. Orthologous to human PTTG1IP (PTTG1 interacting protein).

NR:

description
PREDICTED: pituitary tumor-transforming gene 1 protein-interacting protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241939.1 True 1073 mRNA 0.39 7 4887539 4891669

Neighbor

gene id symbol gene type direction distance location
coq7 coq7,LOC107677563,LOC107740598,LOC107581445,LOC107705527 coding downstream 36615 4848878 ~ 4850924 (-)
notum2 LOC107677565,LOC107581444,LOC107705526,LOC107660052,LOC107584829 coding downstream 46384 4834967 ~ 4841155 (-)
ccr7 ccr7,LOC107677611,LOC107581378,LOC107740599,LOC107705525,LOC107584769,LOC107660053 coding downstream 55575 4829435 ~ 4831964 (-)
nfe2l2b LOC107740600,LOC107677604 coding downstream 68068 4812355 ~ 4819471 (-)
lnpk lnpb,LOC107740586,LOC107677603,LOC107581375,LOC107705573,LOC107660049 coding downstream 83667 4796718 ~ 4803872 (-)
myo10l1 myo10l1,LOC107581381,LOC107740578,LOC107705496,LOC107677542,LOC108430864,LOC108272349 coding upstream 2423 4894092 ~ 4938243 (-)
trnak-uuu_105 NA coding upstream 63877 4955546 ~ 4955618 (-)
pcnt pcnt,LOC107555398,LOC107677569,LOC107660059,LOC107743407,LOC107584825,LOC107705497 coding upstream 64679 4956348 ~ 4991444 (-)
pjvk dfnb59,LOC107555423,LOC107584822 coding upstream 113782 5005451 ~ 5008963 (-)
gulp1b gulp1b,LOC107677600,LOC107741734,LOC107705580,LOC107660061 coding upstream 142285 5033954 ~ 5075079 (-)
LOC122346990 NA non-coding downstream 6146 4867127 ~ 4881393 (-)
G42644 LOC101169590,LOC106917580,LOC108430882 non-coding downstream 183036 4698903 ~ 4704503 (-)
G42614 NA non-coding downstream 381872 4503734 ~ 4505667 (-)
G42615 NA non-coding downstream 384333 4502720 ~ 4503206 (-)
G42606 abi2 non-coding downstream 412747 4473919 ~ 4474792 (-)
G42955 baz2b,LOC107677545 non-coding upstream 242133 5133802 ~ 5228971 (-)
G42960 LOC107584764,LOC107677591,LOC107743335 non-coding upstream 247730 5139399 ~ 5238937 (-)
G42956 NA non-coding upstream 267675 5159344 ~ 5173432 (-)
G42969 NA non-coding upstream 279527 5171196 ~ 5172061 (-)
LOC122346706 NA non-coding upstream 293932 5185601 ~ 5191999 (-)
sumo3a sumo3a,sumo3b,LOC103392195,LOC107668404,LOC108430868 other downstream 1190 4882787 ~ 4886349 (-)
LOC122347558 cycsb,LOC103040542,LOC108273362,LOC108430847 other downstream 62073 4818191 ~ 4825466 (-)
gpr155b gpr155b,LOC107740589,LOC107581372,LOC107584777,LOC107705544,LOC107677583,LOC107660045 other downstream 112993 4766381 ~ 4774546 (-)
dnah9l dnah11,LOC107581427,LOC107677540,LOC108430841,LOC108272446,LOC103372266,LOC104955736,LOC107740597,LOC102781332,LOC107384434 other downstream 148997 4709290 ~ 4738542 (-)
nudt15 LOC107584789,LOC107705561,LOC107706649,LOC107677555,LOC107660035,LOC107581358 other downstream 390121 4493912 ~ 4497418 (-)
G42958 LOC107742327 other upstream 337787 5229456 ~ 5230710 (-)
adam23a adam23,adam23a,LOC107748557,LOC107705602,LOC107660086,LOC107688856 other upstream 731017 5622686 ~ 5639926 (-)
arl6ip6 LOC107688850,LOC107748576,LOC107705609,LOC107660093,LOC107566311,LOC107555419 other upstream 799812 5691481 ~ 5699650 (-)
mylkb mylkb,LOC107688847,LOC107748549,LOC107555454,LOC107705608,LOC107566310,LOC107660138 other upstream 831799 5723468 ~ 5736620 (-)
desmb desmb,LOC107566324,LOC107660100,LOC107705613,LOC107688844,LOC107566784,LOC107748575 other upstream 1067124 5958793 ~ 5966604 (-)

Expression


Co-expression Network