wipf1b (wipf1b,LOC107740590,LOC107677587,LOC107581373,LOC107705551,LOC107660046,LOC107584775)


Basic Information

Item Value
gene id wipf1b
gene name wipf1b,LOC107740590,LOC107677587,LOC107581373,LOC107705551,LOC107660046,LOC107584775
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 4774901 ~ 4787826 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242279.1
TTTGAATGTTATTCCTGTGAATGTGATGGGTTTGTAGACAGCACGCGCTGGGCGGAAACAGTGGGGAGaagttatgagtgtgtgtgtgtgtgtgtgttttctgccaTGAAGGAGTGGCTCAGAACTTGTGTTcctctgtgtttgtgtagaTGCTTCATGATGATGGTCGTTGCTGCATTTGGTTCGTAAGCGCAGGACGCAGAGAAAAAGACGCAAACCGCCGGTCTCACTGAGAGGAGGTGATAAGAAGTAATAAAAATGCCGGTACCTCCTCCGCCTCCTCCTCCCCAACCCCCCACCTTCTCTCAgGCAAACACTGACAAGCCTGTCTTGAATAAATCGGAGCAGCAGGGCAGGAATGCTCTGCTGTCAGACATCTCTAAAGGAGCAAGGCTAAAGAAGGCGGTTACTAATGATCGTAGTGCCCCCGTACTTGACAAACCCaaaggtggtggtggtggtggaggcggaggaggaggcgggcctggaggtggtggaggagggGGAGGTTttggaggtggaggtggaacTCCAGCTGGTCTGGGTGGGCTCTTTCAGGGCGGCATGCCAAAGCTGCGCTCCACTCGAGATGACTCTAGTAGTGTCAGACCTCCAATTTTGCCACCTGGTGCTCGTAGTTCTGGTCCACGTCCCTTTGGAGGAGGGTCTGGCTCTACCCCTCGTCTACCTTTGCAACGCAGTGAATCCGCTGAACCCCCTCGCCCCCGAATGACCCCACCACGTCCTGATACACCTGGGGGGCCTCCTCCGCCACTTCCAAGTGCCCCACGGCCTTTTCAGATTGGGGTTCAGAGCAGGGGACCACCCTCACTTCCAGGGACTCCTCGTTTTGGTTCTGCCCTAACCCCTCCACCTCCAAACCCTCCAGGACGACAGCCTGCACCTCCACCGGTGCCAGCTGCATTTGGTCGTCCTCCGTCCATTCCTTCGCCCTCAGCTGGTCATGCGGGACGGCCACCTCCTCCCCCTGCTCCTGGTCGAGGCGATGACCGTCCTCCACCTATTCCCCCTGCAAATCGCTCTTTGCCACTCACTCGGGACAGCCCGccccctccacctcccccaTCGGCGAGCTGTAAACCaactcctcctccagctccttcTCCTGCTTCTCTGCGGCCACCTGTTAGTGCAGCACCTCCTCTGCCGCCGGGACGCCCAAGCCCATCTACTCCCGAGGAGCATACGCCACGCCTTCCTGAACGGAACCTGTCACTTGGCACGCATCCACCCGCCCCTCCACCTGGGAGATCCGGACCCCTTCCTCCGCCTCCCTCTGAGAGACCGCCCGCGTTGGGCCGGAATGCAAGTGGACGAACAGGTCCTcttccacctccacctccttcTGGCCGCCCTGGAGGAGGAAGTGTAAGGTCATCACCAGCCCCTCCTCCACCGAACAGGCCTGGTGTGGAGCCTCACCGTGGTGGAAGTAGACCACCGCTCCCCCCAGACAGACCCTCCTCTGGACCTCTGCCCCCTCCTCTTCCACCTATGGGCAATGGATACCACAATCAGGGACATCATATAGATGAATGGGAATCGCGCTTCACGTTCCGACCTGTATCGGATCTTCCACCCCCAGATCCCTACATTCCCTCTCAAAAGACCTATCCCAGCAGAATGGCCAGGAACGAAAGCCGAGGTTCGGGAAAGAAAGAGCGAGGTGCACCTCCCCTGCCCCCCATACCTCGGTGAAAGAAACTGTCGTCTCAGGGCCTGACAATCCTTCCCTTACCCATTTATCTTATTTTCTCTGGTACTGtctgtttttgatattttctaCCAGAGTCTTTCATTAAAagaactataaagataacaacATATTACAGACAACATATCTTGTgtaatgtttagtttttgtcaGCTTTAGAGAGTAATACATGAGGCTGTTATGACTATGTCAAGTGATGAGCTCTACAGTAATACTACAGCTAAGTCTGACtttatttttgagtgtttttgttgAGAATGATGCCCTGTTGCAGCGGTTCATTGGCCTTCAAGAGCGTGTGAATGTTTTGGCTTTTTGGCGCTCCTTGACACATACAGACAAATGTCTTTGTCTTATACAGAATATATCGTTGCTTAATCAGGGCAGACATTTCCTTAGATAATGGATTTATAGAGCCACATAGGGCATCGGTGTTTGTTAGACAGTTCTTGATGTAATTATTGTTTGAGAAGGAGtgcaacattttctttaaagcattTTGGTGCGTTTTGGCGCCCCCTACCATAGTTATATAGCATATAAgtcacttaaaatattaaaggagtatgtgtttgctttagtaCCTggatgtgtgcatgtgtatgtggtGATAAGGGCCAAAATTATATATAGGACCGAGTTTATGGGAAAAAGTACATGTGATTTATAAAACACTCTTTAGATCATCCCCCATTTAAACAAGCCTGAGAGAAGACATTGTATGAGACTGATCTTTAAATGAAAGATGATGACTTGCCATAAAATCCTAAGCAGGTGGGTTTCTGTGTATTATGACATTGTGTCTGTGTTGATGTACgccaaaaagacaaaaatgtgtttaagaagtgttatattttatgatgtatGTATGCCCTTGCTTGTTTTGTTGATGTTCGCTCAGTATTATGTTGCCTTACGGATATTTCTCAGATGTGTGCTGTTATATTTCCCTAAAGCACTTGACTATATTCTATAAGTGTATCATACCttgaatttcatttcatttctttttttttccatttatatacTTGGAAAAAATCAAGAAGCCAAGCAATGACTTGGTTTATGCTGCcttatgtttgtttacataaagaGGTGAATTACAGAGGACTTTTAatgacacataaaaaaaagaaaaatttgcaATGATATATGCAATGTAGCATAACATCTGAAGCATACTGAATTTATTAGAGAGGAGAGAGATGATTGCACAGCCAGAAAGAAACAACATTTGCCACCAACTTTATTAGTAATACTAAAGGCctcttaattgttttgtttgcacACGTCACAGTGTTGTGTGGCGAGGTGCTTAATGCGGTACTTTagatgttttctttgtgcatgcAAATGCACATTTCAGTTTCATGCAGCATGTTatgttgtttcttttgtgtattatttacattttttgcaaacaGTCTTTTGCTACTCTGATGTGCCAAATAtgttgttttctaaataaatatgcaagtgAAGCTGGATTTTGcctatcattaaaaaaactaaaaaacactcTTATA
>XM_043242281.1
AAACGTTGCATCACAGACCAATGTCCCGGATAAAGGGAACGAAGTCTCTGTTGTGTTGGTGGAGGAAGAAAAACTAGaTGCTTCATGATGATGGTCGTTGCTGCATTTGGTTCGTAAGCGCAGGACGCAGAGAAAAAGACGCAAACCGCCGGTCTCACTGAGAGGAGGTGATAAGAAGTAATAAAAATGCCGGTACCTCCTCCGCCTCCTCCTCCCCAACCCCCCACCTTCTCTCAgGCAAACACTGACAAGCCTGTCTTGAATAAATCGGAGCAGCAGGGCAGGAATGCTCTGCTGTCAGACATCTCTAAAGGAGCAAGGCTAAAGAAGGCGGTTACTAATGATCGTAGTGCCCCCGTACTTGACAAACCCaaaggtggtggtggtggtggaggcggaggaggaggcgggcctggaggtggtggaggagggGGAGGTTttggaggtggaggtggaacTCCAGCTGGTCTGGGTGGGCTCTTTCAGGGCGGCATGCCAAAGCTGCGCTCCACTCGAGATGACTCTAGTAGTGTCAGACCTCCAATTTTGCCACCTGGTGCTCGTAGTTCTGGTCCACGTCCCTTTGGAGGAGGGTCTGGCTCTACCCCTCGTCTACCTTTGCAACGCAGTGAATCCGCTGAACCCCCTCGCCCCCGAATGACCCCACCACGTCCTGATACACCTGGGGGGCCTCCTCCGCCACTTCCAAGTGCCCCACGGCCTTTTCAGATTGGGGTTCAGAGCAGGGGACCACCCTCACTTCCAGGGACTCCTCGTTTTGGTTCTGCCCTAACCCCTCCACCTCCAAACCCTCCAGGACGACAGCCTGCACCTCCACCGGTGCCAGCTGCATTTGGTCGTCCTCCGTCCATTCCTTCGCCCTCAGCTGGTCATGCGGGACGGCCACCTCCTCCCCCTGCTCCTGGTCGAGGCGATGACCGTCCTCCACCTATTCCCCCTGCAAATCGCTCTTTGCCACTCACTCGGGACAGCCCGccccctccacctcccccaTCGGCGAGCTGTAAACCaactcctcctccagctccttcTCCTGCTTCTCTGCGGCCACCTGTTAGTGCAGCACCTCCTCTGCCGCCGGGACGCCCAAGCCCATCTACTCCCGAGGAGCATACGCCACGCCTTCCTGAACGGAACCTGTCACTTGGCACGCATCCACCCGCCCCTCCACCTGGGAGATCCGGACCCCTTCCTCCGCCTCCCTCTGAGAGACCGCCCGCGTTGGGCCGGAATGCAAGTGGACGAACAGGTCCTcttccacctccacctccttcTGGCCGCCCTGGAGGAGGAAGTGTAAGGTCATCACCAGCCCCTCCTCCACCGAACAGGCCTGGTGTGGAGCCTCACCGTGGTGGAAGTAGACCACCGCTCCCCCCAGACAGACCCTCCTCTGGACCTCTGCCCCCTCCTCTTCCACCTATGGGCAATGGATACCACAATCAGGGACATCATATAGATGAATGGGAATCGCGCTTCACGTTCCGACCTGTATCGGATCTTCCACCCCCAGATCCCTACATTCCCTCTCAAAAGACCTATCCCAGCAGAATGGCCAGGAACGAAAGCCGAGGTTCGGGAAAGAAAGAGCGAGGTGCACCTCCCCTGCCCCCCATACCTCGGTGAAAGAAACTGTCGTCTCAGGGCCTGACAATCCTTCCCTTACCCATTTATCTTATTTTCTCTGGTACTGtctgtttttgatattttctaCCAGAGTCTTTCATTAAAagaactataaagataacaacATATTACAGACAACATATCTTGTgtaatgtttagtttttgtcaGCTTTAGAGAGTAATACATGAGGCTGTTATGACTATGTCAAGTGATGAGCTCTACAGTAATACTACAGCTAAGTCTGACtttatttttgagtgtttttgttgAGAATGATGCCCTGTTGCAGCGGTTCATTGGCCTTCAAGAGCGTGTGAATGTTTTGGCTTTTTGGCGCTCCTTGACACATACAGACAAATGTCTTTGTCTTATACAGAATATATCGTTGCTTAATCAGGGCAGACATTTCCTTAGATAATGGATTTATAGAGCCACATAGGGCATCGGTGTTTGTTAGACAGTTCTTGATGTAATTATTGTTTGAGAAGGAGtgcaacattttctttaaagcattTTGGTGCGTTTTGGCGCCCCCTACCATAGTTATATAGCATATAAgtcacttaaaatattaaaggagtatgtgtttgctttagtaCCTggatgtgtgcatgtgtatgtggtGATAAGGGCCAAAATTATATATAGGACCGAGTTTATGGGAAAAAGTACATGTGATTTATAAAACACTCTTTAGATCATCCCCCATTTAAACAAGCCTGAGAGAAGACATTGTATGAGACTGATCTTTAAATGAAAGATGATGACTTGCCATAAAATCCTAAGCAGGTGGGTTTCTGTGTATTATGACATTGTGTCTGTGTTGATGTACgccaaaaagacaaaaatgtgtttaagaagtgttatattttatgatgtatGTATGCCCTTGCTTGTTTTGTTGATGTTCGCTCAGTATTATGTTGCCTTACGGATATTTCTCAGATGTGTGCTGTTATATTTCCCTAAAGCACTTGACTATATTCTATAAGTGTATCATACCttgaatttcatttcatttctttttttttccatttatatacTTGGAAAAAATCAAGAAGCCAAGCAATGACTTGGTTTATGCTGCcttatgtttgtttacataaagaGGTGAATTACAGAGGACTTTTAatgacacataaaaaaaagaaaaatttgcaATGATATATGCAATGTAGCATAACATCTGAAGCATACTGAATTTATTAGAGAGGAGAGAGATGATTGCACAGCCAGAAAGAAACAACATTTGCCACCAACTTTATTAGTAATACTAAAGGCctcttaattgttttgtttgcacACGTCACAGTGTTGTGTGGCGAGGTGCTTAATGCGGTACTTTagatgttttctttgtgcatgcAAATGCACATTTCAGTTTCATGCAGCATGTTatgttgtttcttttgtgtattatttacattttttgcaaacaGTCTTTTGCTACTCTGATGTGCCAAATAtgttgttttctaaataaatatgcaagtgAAGCTGGATTTTGcctatcattaaaaaaactaaaaaacactcTTATA

Function

symbol description
wipf1b Predicted to enable actin binding activity. Predicted to be involved in actin filament-based movement. Predicted to act upstream of or within actin polymerization or depolymerization. Predicted to be located in actin cytoskeleton. Predicted to be active in actin filament. Orthologous to human WIPF1 (WAS/WASL interacting protein family member 1).

NR:

description
PREDICTED: WAS/WASL-interacting protein family member 1

GO:

id name namespace
GO:0008154 actin polymerization or depolymerization biological_process
GO:0015629 actin cytoskeleton cellular_component
GO:0003779 actin binding molecular_function

KEGG:

id description
K19475 WIPF; WAS/WASL-interacting protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242279.1 True 3261 mRNA 0.47 8 4774901 4787624
XM_043242281.1 False 3189 mRNA 0.47 9 4774901 4787826

Neighbor

gene id symbol gene type direction distance location
ola1 ola1,LOC107660044 coding downstream 9546 4760224 ~ 4765355 (-)
sp3b sp3b,LOC107740591,LOC107677581,LOC107581370,LOC107660043,LOC107584779 coding downstream 15286 4748038 ~ 4759615 (-)
scn1lab scn1lab,LOC107677574,LOC107705566,LOC107660039,LOC107581364,LOC107706643,LOC108242159 coding downstream 154564 4590164 ~ 4620337 (-)
xirp2a LOC107581361,LOC107677546,LOC107706644,LOC107705540,LOC107660038,LOC107584781 coding downstream 192637 4554470 ~ 4582264 (-)
b3galt1a b3galt1a,LOC107706645,LOC107677552,LOC107660037,LOC107705557,LOC107584782,LOC107581362 coding downstream 224288 4541260 ~ 4550613 (-)
chrna1 chrna1,LOC106595477 coding upstream 693 4788519 ~ 4793257 (-)
atp5mc3b atp5g3b,LOC107581374,LOC107677599,LOC107705563,LOC107740588,LOC107584774,LOC107660047,LOC108430874,LOC103042584 coding upstream 6214 4794040 ~ 4796189 (-)
lnpk lnpb,LOC107740586,LOC107677603,LOC107581375,LOC107705573,LOC107660049 coding upstream 8892 4796718 ~ 4803872 (-)
nfe2l2b LOC107740600,LOC107677604 coding upstream 24529 4812355 ~ 4819471 (-)
ccr7 ccr7,LOC107677611,LOC107581378,LOC107740599,LOC107705525,LOC107584769,LOC107660053 coding upstream 41609 4829435 ~ 4831964 (-)
G42644 LOC101169590,LOC106917580,LOC108430882 non-coding downstream 70398 4698903 ~ 4704503 (-)
G42614 NA non-coding downstream 269234 4503734 ~ 4505667 (-)
G42615 NA non-coding downstream 271695 4502720 ~ 4503206 (-)
G42606 abi2 non-coding downstream 300109 4473919 ~ 4474792 (-)
G42586 NA non-coding downstream 342574 4430558 ~ 4432327 (-)
LOC122346990 NA non-coding upstream 79301 4867127 ~ 4881393 (-)
G42955 baz2b,LOC107677545 non-coding upstream 345976 5133802 ~ 5228971 (-)
G42960 LOC107584764,LOC107677591,LOC107743335 non-coding upstream 351573 5139399 ~ 5238937 (-)
G42956 NA non-coding upstream 371518 5159344 ~ 5173432 (-)
G42969 NA non-coding upstream 383370 5171196 ~ 5172061 (-)
gpr155b gpr155b,LOC107740589,LOC107581372,LOC107584777,LOC107705544,LOC107677583,LOC107660045 other downstream 355 4766381 ~ 4774546 (-)
dnah9l dnah11,LOC107581427,LOC107677540,LOC108430841,LOC108272446,LOC103372266,LOC104955736,LOC107740597,LOC102781332,LOC107384434 other downstream 36359 4709290 ~ 4738542 (-)
nudt15 LOC107584789,LOC107705561,LOC107706649,LOC107677555,LOC107660035,LOC107581358 other downstream 277483 4493912 ~ 4497418 (-)
cdk15 cdk15,LOC107706659,LOC107677597,LOC107660030 other downstream 359688 4394407 ~ 4415213 (-)
G42351 NA other downstream 813359 3958367 ~ 3961542 (-)
LOC122347558 cycsb,LOC103040542,LOC108273362,LOC108430847 other upstream 30365 4818191 ~ 4825466 (-)
sumo3a sumo3a,sumo3b,LOC103392195,LOC107668404,LOC108430868 other upstream 94961 4882787 ~ 4886349 (-)
G42958 LOC107742327 other upstream 441630 5229456 ~ 5230710 (-)
adam23a adam23,adam23a,LOC107748557,LOC107705602,LOC107660086,LOC107688856 other upstream 834860 5622686 ~ 5639926 (-)
arl6ip6 LOC107688850,LOC107748576,LOC107705609,LOC107660093,LOC107566311,LOC107555419 other upstream 903655 5691481 ~ 5699650 (-)

Expression


Co-expression Network