LOC122349504 (mcee,LOC107670763,LOC107585993,LOC107750491,LOC107700438,LOC107595079)


Basic Information

Item Value
gene id LOC122349504
gene name mcee,LOC107670763,LOC107585993,LOC107750491,LOC107700438,LOC107595079
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 17447140 ~ 17449363 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043245566.1
gacATGTTACGAACATTTTATATGGGTAAATTATGAGTCTATTATCATAGCTGAACACATGCATCGAgttgtttaaataaagttttgcgTGTTTGCGATGACCGCAAAGATGGCTTCCTCTTTACTGAAGGTTGCAGTTACAGGTCTCTCGAGGTGTGCATGGCACACTTTACCCTCAGTGAGGGCATTGCGTCTGACTGTACCCGTCGCTCAAGGTGTCCCTCAGTCATTATGGAAGTTAGGCAGACTGAATCATGTGGCTATCGCAGTACCAGACCTAGAGAAAGCCACAGCACTGTATCGTGATGTGCTGGGGGCTCAAGTAAGCGCCACCGTACCACTCCCTGAGCACGGGGTGTACACTGTGTTTGTAGAACTGGGAAACACCAAATTAGAGCTTCTGCACCCTCTGGGAGAGAAAAGCCCTATTGCAGGATTCCTGCAGAAGAACAAAGCTGGAGGGATGCATCATATCTGTATTGAGGTGGATGATATCAACGCTGCAATAGTTGATttgaaggaaaagaaaatcagGCTGCTCTCCCCAGAGCCACGGATAGGGGCTCACGGCAAACCAGTGATGTTCCTCCACCCTAAAGACTGTGATGGGGTTCTTGTGGAGATAGAACAAGCCTAGCTATCACACATGAGAGTATCTAGCATACAGAGACACTTTGATTTTTGACACTTAAGCTATTGTGATTATATTAAGAAGAATGGTATGATTCCACTTGTTTCACTAATCATTAATCTGTTATGGTGTGCTTTATATTCTTGGCCTTTTTTTCTGAAGTAAAGATTTTCTTTAATCACTTAATAAATGGTTAAAGTTAGTTTGATCCTTTGACTCTTTGCAAGCTCACACATTCAAAATGTGTGCAGAGTatgtaaatcatgtttaatttttttttccccctcgcaATAACATTTGTGGGGTACACTTggtatttttcttgtttttttttttatgatgattacAACATCCGAAGCCGAAATAAGCttattaaattatatgcatGCTTTAAATGCTATGATAAAATGTTAGAtatgttttgctatttttatgaaTGTGAATTGAAATCCTCGCAAGCCTCTCATCTGGCTCTCAGTGGAACAGACAGATTgaagctttctttttttggctGACAACCATGTATTTGGGAGACAGGTTGGCTCATACCCATCTCTCCACTGTAGTCAACCCTCCGCCAAATAGAAAGCTGGTTTTTGTTCTTATGCCTTAAATCTGCttttttgagagagagggagagagagagagggagataaCTAGAGGAGTGAGATTAAGAACTGATGTTTGTGGGCTTTCTCACTGTGTGGTCTCCAaggttttgtttgaattttcCTGCTTCAGCACCATTAGAATAAAAGGATCTTTAATGACGTTTTAA
>XM_043245567.1
AATTATGAGTCTATTATCATAGCTGAACACATGCATCGAgttgtttaaataaagttttgcgTGTTTGCGATGACCGCAAAGATGGCTTCCTCTTTACTGAAGGTTGCAGGTCTCTCGAGGTGTGCATGGCACACTTTACCCTCAGTGAGGGCATTGCGTCTGACTGTACCCGTCGCTCAAGGTGTCCCTCAGTCATTATGGAAGTTAGGCAGACTGAATCATGTGGCTATCGCAGTACCAGACCTAGAGAAAGCCACAGCACTGTATCGTGATGTGCTGGGGGCTCAAGTAAGCGCCACCGTACCACTCCCTGAGCACGGGGTGTACACTGTGTTTGTAGAACTGGGAAACACCAAATTAGAGCTTCTGCACCCTCTGGGAGAGAAAAGCCCTATTGCAGGATTCCTGCAGAAGAACAAAGCTGGAGGGATGCATCATATCTGTATTGAGGTGGATGATATCAACGCTGCAATAGTTGATttgaaggaaaagaaaatcagGCTGCTCTCCCCAGAGCCACGGATAGGGGCTCACGGCAAACCAGTGATGTTCCTCCACCCTAAAGACTGTGATGGGGTTCTTGTGGAGATAGAACAAGCCTAGCTATCACACATGAGAGTATCTAGCATACAGAGACACTTTGATTTTTGACACTTAAGCTATTGTGATTATATTAAGAAGAATGGTATGATTCCACTTGTTTCACTAATCATTAATCTGTTATGGTGTGCTTTATATTCTTGGCCTTTTTTTCTGAAGTAAAGATTTTCTTTAATCACTTAATAAATGGTTAAAGTTAGTTTGATCCTTTGACTCTTTGCAAGCTCACACATTCAAAATGTGTGCAGAGTatgtaaatcatgtttaatttttttttccccctcgcaATAACATTTGTGGGGTACACTTggtatttttcttgtttttttttttatgatgattacAACATCCGAAGCCGAAATAAGCttattaaattatatgcatGCTTTAAATGCTATGATAAAATGTTAGAtatgttttgctatttttatgaaTGTGAATTGAAATCCTCGCAAGCCTCTCATCTGGCTCTCAGTGGAACAGACAGATTgaagctttctttttttggctGACAACCATGTATTTGGGAGACAGGTTGGCTCATACCCATCTCTCCACTGTAGTCAACCCTCCGCCAAATAGAAAGCTGGTTTTTGTTCTTATGCCTTAAATCTGCttttttgagagagagggagagagagagagggagataaCTAGAGGAGTGAGATTAAGAACTGATGTTTGTGGGCTTTCTCACTGTGTGGTCTCCAaggttttgtttgaattttcCTGCTTCAGCACCATTAGAATAAAAGGATCTTTAATGACGTTTTAA

Function

symbol description
mcee Predicted to enable methylmalonyl-CoA epimerase activity. Predicted to be involved in L-methylmalonyl-CoA metabolic process. Orthologous to human MCEE (methylmalonyl-CoA epimerase).

NR:

description
PREDICTED: methylmalonyl-CoA epimerase, mitochondrial-like isoform X1

GO: NA

KEGG:

id description
K05606 MCEE, epi; methylmalonyl-CoA/ethylmalonyl-CoA epimerase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043245566.1 True 1409 mRNA 0.41 3 17447140 17449363
XM_043245567.1 False 1375 mRNA 0.41 3 17447140 17449335

Neighbor

gene id symbol gene type direction distance location
LOC122349684 LOC107755052,LOC107595076,LOC107750488 coding downstream 1092 17374457 ~ 17446048 (-)
myo1ea myo1e,myo1ea,LOC107750494,LOC107755051 coding downstream 174973 17230383 ~ 17272167 (-)
rnf111 LOC107731799,LOC107700434,LOC107595081,LOC107750495 coding downstream 221712 17193981 ~ 17225428 (-)
sltm LOC107670749,LOC107700432,LOC107750497,LOC107731800 coding downstream 253857 17182012 ~ 17193283 (-)
adam10a LOC107750500,LOC107670741,LOC107700430,LOC107741424,LOC107585986 coding downstream 289734 17114794 ~ 17157406 (-)
LOC122347931 mtmr10,LOC107670739,LOC107750493,LOC107755009 coding upstream 5668 17455031 ~ 17476756 (-)
sord sord,LOC107585997,LOC107700439,LOC107755029,LOC107670753,LOC107595113,LOC107670754,LOC107750486 coding upstream 160785 17610148 ~ 17612491 (-)
terb2 LOC107750636,LOC107586000,LOC107670733 coding upstream 164848 17614211 ~ 17616030 (-)
LOC122348815 cilp,LOC107554910,LOC107750479,LOC107670750,LOC107700449,LOC107755059,LOC107595070 coding upstream 407378 17856741 ~ 17863242 (-)
igdcc3 igdcc3,LOC107750478,LOC107670768,LOC107755062,LOC107700450,LOC107554891 coding upstream 439244 17888607 ~ 17957580 (-)
G53884 lipc,lipca,LOC107670742 non-coding downstream 339693 17106882 ~ 17107447 (-)
G53859 NA non-coding downstream 415350 17031509 ~ 17031790 (-)
G53854 NA non-coding downstream 434158 17012219 ~ 17012982 (-)
G53850 NA non-coding downstream 440458 16999760 ~ 17006682 (-)
G53849 NA non-coding downstream 441244 16999226 ~ 17005896 (-)
G53963 NA non-coding upstream 158683 17608046 ~ 17608330 (-)
G53965 NA non-coding upstream 158983 17608346 ~ 17608605 (-)
G53969 NA non-coding upstream 159473 17608836 ~ 17609042 (-)
G53970 NA non-coding upstream 159790 17609153 ~ 17609358 (-)
G53974 NA non-coding upstream 177758 17627121 ~ 17627320 (-)
serf2b NA other downstream 399099 17046444 ~ 17048041 (-)
G53797 tpm1,LOC103462590 other downstream 512888 16881893 ~ 16934252 (-)
nrn1lb nrn1lb,LOC107750645,LOC107586039,LOC107594653,LOC107741430 other downstream 882802 16560418 ~ 16564338 (-)
rnaseka rnaseka,rnasek,LOC107750577,LOC107561913,LOC107678101,LOC107749794,LOC107594736,LOC107669181 other downstream 2471972 14973703 ~ 14975168 (-)
G52917 LOC105896813 other downstream 3301860 14144506 ~ 14145280 (-)
LOC122349446 arl14ep,LOC107663944,LOC107740492,LOC107554899,LOC107700465,LOC107755038 other upstream 1216910 18666273 ~ 18669833 (-)
G54312 LOC107663979,LOC107557712,LOC107740422,LOC107700467,LOC107553073,LOC107755077,LOC108430810 other upstream 1292797 18742160 ~ 18794207 (-)
G54330 LOC107557708,LOC107553077,LOC107740430,LOC107700368 other upstream 1396913 18846276 ~ 19291166 (-)
LOC122348206 tph1b,LOC107740493,LOC107557706,LOC107663941,LOC107553080,LOC108430795 other upstream 1460285 18909648 ~ 18914921 (-)
G54377 mns1,LOC107755086,LOC107553079,LOC107740431,LOC107663983 other upstream 1862285 19311648 ~ 19312124 (-)

Expression


Co-expression Network