terb2 (LOC107750636,LOC107586000,LOC107670733)


Basic Information

Item Value
gene id terb2
gene name LOC107750636,LOC107586000,LOC107670733
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 17614211 ~ 17616030 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043243101.1
CCTGACAGACACTCTGCTCTAAAATTATACATGGTTATTACATTCTGACCTGTATGACAGGATGCTTAGGGGTGTATAATTGATATATTAGACAAATCTTTGCTTCACTTCAGATGCTCCAACTACCTGCTCACCCGGATGGAGTAGTTTCACGGTTCGCGAGTTGTTGAATCGATACATTCTGATCCGAAATAAATCGTTCAGACCGGTTTGAGGGAGGTTTATAGATTCGACTCAgaagaatgattcatttaagAATCGGACGCTGCTCGTTAAGACCTGAGGCGACGTTCTAGCTTTCTCCGTTACAATTCACGTGTTTGTTACCGAACTGCTTTAATGAGTTAGGTCTTAAATATGTCTTAAATCAAAAATTACTTAACACGTATCCTCGCTCTCGCTAAAGAAGGATAACGTAATCGCAGCATAAAGGCATTCAAGTCGTTTTTGTGGCAACTGAAGTGACAAACACCGTAGCATAAGCATGTTTAAAGACAAAACTGCATGGTTCTCCGACAGTGTTGAAAAGGGGGCAACCAACTTTTGGGTTTCTGAAGGGGGAGGTCTTTCTTCCTGGAAAATGGCAGATTACCTCTTCAGTGCTGATGCGTCTTCTGAAGACACTGAAAGGATATACGGAAGTGAGGGTTATGTCGAGAACAGGGCAACGGTTTTCCACAGCGACTTCCTGTCAGCTTGTAAAGCCCGCCAGAGTGTAGCATCTGTGCCTATTGGCCACTATGTTCTGCCACCAGACTCTGTCCAGGATGAAATGAGAGCGCTGATGGGAAGGTTCATTTGGGAAAGTGAGGAGCAGCTTCTCAATCTATTAAAGGTGATGTGCGAAGATCAGATATACACTGAAGCGTCTGCAGACGGTCTGTCTGAGGAGACTGAAAATCAGCCAGTGAGAAAGAAGAACAGCCAGGATGATTACGAATCTGTTGCATCGGCGAACAAAGTATGTTCTTGTAGTGTGATGTGGAAATATCCTGTTAACAACATGATCTCAGGATATGTTCATATTGACCAAATGAAGAAGCATTCAGGGGAACTTCACGATTTTCTTCCCTACCTCCATGGCCATAACGTTTCAAGACCTAATGGCGTGACGCCTCGTCATCGTCGCAAAGAAATTTAAAACAGTATTCTTCA
>XM_043243102.1
CCTGACAGACACTCTGCTCTAAAATTATACATGGTTATTACATTCTGACCTGTATGACAGGATGCTTAGGGGTGTATAATTGATATATTAGACAAATCTTTGCTTCACTTCAGATGCTCCAACTACCTGCTCACCCGGATGGAGTAGTTTCACGGTTCGCGAGTTGTTGAATCGATACATTCTGATCCGAAATAAATCGTTCAGACCGGTTTGAGGGAGGTTTATAGATTCGACTCAgaagaatgattcatttaagAATCGGACGCTGCTCGTTAAGACCTGAGGCGACGTTCTAGCTTTCTCCGTTACAATTCACGTGTTTGTTACCGAACTGCTTTAATGAGTTAGGTCTTAAATATGTCTTAAATCAAAAATTACTTAACACGTATCCTCGCTCTCGCTAAAGAAGGATAACGTAATCGCAGCATAAAGGCATTCAAGTCGTTTTTGTGGCAACTGAAGTGACAAACACCGTAGCATAAGCATGTTTAAAGACAAAACTGCATGGTTCTCCGACAGTGTTGAAAAGGGGGCAACCAACTTTTGGGTTTCTGAAGGGGGAGGTCTTTCTTCCTGGAAAATGGCAGATTACCTCTTCAGTGCTGATGCGTCTTCTGAAGACACTGAAAGGATATACGGAAGTGAGGGTTATGTCGAGAACAGGGCAACGGTTTTCCACAGCGACTTCCTGTCAGCTTGTAAAGCCCGCCAGAGTGTAGCATCTGTGCCTATTGGCCACTATGTTCTGCCACCAGACTCTGTCCAGGATGAAATGAGAGCGCTGATGGGAAGGTTCATTTGGGAAAGTGAGGAGCAGGTGATGTGCGAAGATCAGATATACACTGAAGCGTCTGCAGACGGTCTGTCTGAGGAGACTGAAAATCAGCCAGTGAGAAAGAAGAACAGCCAGGATGATTACGAATCTGTTGCATCGGCGAACAAAGTATGTTCTTGTAGTGTGATGTGGAAATATCCTGTTAACAACATGATCTCAGGATATGTTCATATTGACCAAATGAAGAAGCATTCAGGGGAACTTCACGATTTTCTTCCCTACCTCCATGGCCATAACGTTTCAAGACCTAATGGCGTGACGCCTCGTCATCGTCGCAAAGAAATTTAAAACAGTATTCTTCA

Function

NR:

description
telomere repeats-binding bouquet formation protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043243101.1 True 1155 mRNA 0.43 7 17614211 17616030
XM_043243102.1 False 1137 mRNA 0.44 7 17614211 17616030

Neighbor

gene id symbol gene type direction distance location
sord sord,LOC107585997,LOC107700439,LOC107755029,LOC107670753,LOC107595113,LOC107670754,LOC107750486 coding downstream 1720 17610148 ~ 17612491 (-)
LOC122347931 mtmr10,LOC107670739,LOC107750493,LOC107755009 coding downstream 137455 17455031 ~ 17476756 (-)
LOC122349504 mcee,LOC107670763,LOC107585993,LOC107750491,LOC107700438,LOC107595079 coding downstream 164848 17447140 ~ 17449363 (-)
LOC122349684 LOC107755052,LOC107595076,LOC107750488 coding downstream 168163 17374457 ~ 17446048 (-)
myo1ea myo1e,myo1ea,LOC107750494,LOC107755051 coding downstream 342044 17230383 ~ 17272167 (-)
LOC122348815 cilp,LOC107554910,LOC107750479,LOC107670750,LOC107700449,LOC107755059,LOC107595070 coding upstream 240711 17856741 ~ 17863242 (-)
igdcc3 igdcc3,LOC107750478,LOC107670768,LOC107755062,LOC107700450,LOC107554891 coding upstream 272577 17888607 ~ 17957580 (-)
igdcc4 igdcc4,LOC107670755,LOC107700451,LOC107595068,LOC107755063,LOC107554907,LOC107750477 coding upstream 344353 17960383 ~ 18014175 (-)
nap1l4b nap1l4,nap1l4b,LOC107700452,LOC107670756 coding upstream 405262 18021292 ~ 18030556 (-)
cars1 cars,LOC107740410,LOC107700453,LOC107670769,LOC107755065 coding upstream 415113 18031143 ~ 18044557 (-)
G53970 NA non-coding downstream 4853 17609153 ~ 17609358 (-)
G53969 NA non-coding downstream 5169 17608836 ~ 17609042 (-)
G53965 NA non-coding downstream 5606 17608346 ~ 17608605 (-)
G53963 NA non-coding downstream 5881 17608046 ~ 17608330 (-)
G53949 apba2b,LOC107755052 non-coding downstream 29045 17346340 ~ 17585166 (-)
G53974 NA non-coding upstream 11091 17627121 ~ 17627320 (-)
G53983 NA non-coding upstream 15973 17632003 ~ 17636019 (-)
G54087 mybpc3,LOC107740474,LOC107670721,LOC107554890 non-coding upstream 439563 18055593 ~ 18056537 (-)
G54093 NA non-coding upstream 454621 18070651 ~ 18074482 (-)
G54104 NA non-coding upstream 522623 18138653 ~ 18138939 (-)
serf2b NA other downstream 566170 17046444 ~ 17048041 (-)
G53797 tpm1,LOC103462590 other downstream 679959 16881893 ~ 16934252 (-)
nrn1lb nrn1lb,LOC107750645,LOC107586039,LOC107594653,LOC107741430 other downstream 1049873 16560418 ~ 16564338 (-)
rnaseka rnaseka,rnasek,LOC107750577,LOC107561913,LOC107678101,LOC107749794,LOC107594736,LOC107669181 other downstream 2639043 14973703 ~ 14975168 (-)
G52917 LOC105896813 other downstream 3468931 14144506 ~ 14145280 (-)
LOC122349446 arl14ep,LOC107663944,LOC107740492,LOC107554899,LOC107700465,LOC107755038 other upstream 1050243 18666273 ~ 18669833 (-)
G54312 LOC107663979,LOC107557712,LOC107740422,LOC107700467,LOC107553073,LOC107755077,LOC108430810 other upstream 1126130 18742160 ~ 18794207 (-)
G54330 LOC107557708,LOC107553077,LOC107740430,LOC107700368 other upstream 1230246 18846276 ~ 19291166 (-)
LOC122348206 tph1b,LOC107740493,LOC107557706,LOC107663941,LOC107553080,LOC108430795 other upstream 1293618 18909648 ~ 18914921 (-)
G54377 mns1,LOC107755086,LOC107553079,LOC107740431,LOC107663983 other upstream 1695618 19311648 ~ 19312124 (-)

Expression


Co-expression Network