G28784


Basic Information

Item Value
gene id G28784
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 7804266 ~ 7804653 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU32546
CCAAATTGCAGTTTCAGTGCAGCCTCAAAGAGCTCTACATGATCCCAGCCGAGGAATAATGGTCTTATCTAGCGAAACGATTGGTCATTTTCTAAACAAAACAAAACAAAATTATATACTTTTTAACCTCAAATGTGCGTCTTGCACTGGCTCTGCGATGCGCCATGCATTACGTAATCATGTTGGAAAGGTCACACGTGACGTAGGCAGAAGTAAAACTCATTTTCATTTTCTCCTCCAACTTCAAAATCGTCCGACATCGTTGTTTAACCTTTTTTTTTTGTAAAGGCCGTTACTTAGTCTTTGCACATTCGCTTTACTTCCGCCTACGTCACGCATGACCTTTCCAACGTGATTATGTAATGCGTAGCGCATCGCAGAGCTAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU32546 True 388 lncRNA 0.27 1 7804266 7804653

Neighbor

gene id symbol gene type direction distance location
CI01000004_07775338_07780352 ANGPTL4 coding upstream 22948 7775242 ~ 7781318 (+)
CI01000004_07759670_07760529 RPS28P9, RPS28 coding upstream 43269 7759509 ~ 7761023 (+)
CI01000004_07712175_07712384 NA coding upstream 91864 7712175 ~ 7712402 (+)
CI01000004_07686845_07692184 NR2F6, NR2F6A, NR2F6B coding upstream 111184 7686018 ~ 7693082 (+)
CI01000004_07654234_07655677 MRPL34 coding upstream 148485 7654234 ~ 7656383 (+)
CI01000004_07823292_07824588 NA coding downstream 18183 7822836 ~ 7826203 (+)
CI01000004_07843003_07860951 NA coding downstream 38350 7843003 ~ 7862424 (+)
CI01000004_07868939_07899539 PIK3R2 coding downstream 63967 7868620 ~ 7900206 (+)
CI01000004_07903583_07906667 NA coding downstream 98930 7903583 ~ 7906670 (+)
CI01000004_07907663_07910335 MPV17L2 coding downstream 103010 7907663 ~ 7910478 (+)
G28780 NA non-coding upstream 37877 7765563 ~ 7766389 (+)
G28779 NA non-coding upstream 39555 7764512 ~ 7764711 (+)
G28757 NA non-coding upstream 50884 7753066 ~ 7753382 (+)
G28754 NA non-coding upstream 60557 7743216 ~ 7743709 (+)
G28790 NA non-coding downstream 17164 7821817 ~ 7822017 (+)
G28791 NA non-coding downstream 22715 7827368 ~ 7827682 (+)
G28797 NA non-coding downstream 178828 7983481 ~ 7983777 (+)
G28800 NA non-coding downstream 220838 8025491 ~ 8025898 (+)
G28801 NA non-coding downstream 223597 8028250 ~ 8033712 (+)
CI01000004_06571261_06572539 SEP15 other upstream 1229845 6570771 ~ 6572667 (+)
G28302 NA other upstream 1302179 6470028 ~ 6502087 (+)
G28165 NA other upstream 2071265 5732589 ~ 5733001 (+)
G27805 NA other upstream 2430463 5372825 ~ 5373803 (+)
CI01000004_08414451_08436256 NA other downstream 629052 8414316 ~ 8439933 (+)
G28859 NA other downstream 794582 8599235 ~ 8599603 (+)
CI01000004_08976512_08980033 TTPA other downstream 1171785 8976254 ~ 8980984 (+)
G30797 NA other downstream 2692723 10497376 ~ 10497788 (+)
G31710 NA other downstream 3832598 11637251 ~ 11642400 (+)

Expression


Co-expression Network