G29562


Basic Information

Item Value
gene id G29562
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 7899358 ~ 7904097 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU33468
TACAAAATCAAGTGCTGCCCTTCATTTTTTTCCTCTTTCTAGAAGCTGTTTCACATGGATATTCGTCACAATGGGGAAGATGATTACAATTTCTGTTTAATGCAACTTTAAAAAGATCTGTTGCATAAAATCCAGATGTCTGACATTCTTAGAAAGAGGAACAAAAATATTGTCAGCATATTTAATGATTTAAAACCATTCTGATCTAGCTGTTGGTGAACTTTAATTTGAAATATTCTCTAGGTTGTTGCTACAGATTTTCCACCCCCAGGTAATCTAAGGACACATGCCAAATTGTTTGTCAAAGGACAACTGACCAAGCAAGCTCATGGTACGGTACTTTCTGCTGCTTCAGCATGACATTCCTTGTAAAAGCCACAGGATCGCATCACACATCACAAGATCAAACTGATGACAACAGACAAGAAGGTGCAATAGACTCAATATCTTTTTATTGTCTTAAAAATAATTCCATCTACCTATTAAAGAGCCATATCTCTGTAATGCTTGTGTACCTGTTTGAGAGACAAACAACACTGATGCAAACTGTACACTGAAAAATCTGCACCCAAAAACAGATTGGACAGAACAGAAGTAGTAAAAGGAAACAGAAGTATGTACATAAAGTTTGTGCGCGCACACACACACACACACACACACACACACACACACACACACACAGTAGAAATGTACTGGGTAACTAACAGTGCTCCCCATCCTCCATGTCTAATGGCACTTTGGTGTGCATTATCTTCAACAGACTACTTCATGCACTCAGGGGAAACAAGACAGTAAGGTATCATTTAGTTTAAAGAGGTAAAGGATAATTAGTGGTTATGTCATAACCACTAAATACAAAAATACATGTCTATTAAACATTTGACCCTGCTGTATCTTACTTTCAGTTTATTTCTTGTCATAGAAACAACGAAGGGGAAAAAAAGAACAGCTAATTTTAGTCAATGCTCCAAATGAGACTACAGAAGGAAGTTAGATAGAAATCAGGATAAAATTTTCATAACTTTTCATTCTGGACTTTTATCATTCTATGTAACTTGAAAAACATGTCTGCTATGGAAAGAAAAAAAATCAACGAAGAAGAAACCTGGGAAACCTGCTCTGGGTCATAGCTGCATTTTTAAAGACCATATTAAATTTCCTTTTTATTCAGAAGAAAATATATTGCGAGGTGAGGGAGCACTGTTTAAAGTGAACAAAGAAGGAAAACAAAATCTTCAAGTTTAAAACAACAGAGGCACGAAAAAAAAAAAAAAAAGACAAGAAACCCCGTCTGACAGATTCCTTGCAGGACCAGACAGCACATTTGAAAATACATCTTCTATTTGGTTAATTAGATACTGTAAACATTTGTAACTGTACTGAACGGAAGAGAAATATTCAAGCTAGCTTATCTTTGAATCTGTAAGGTCATTTCTTACAATGAGAAACAAAACACTTTAAAAAGGAGTTAAAGAAAATAAAAACAAAGAACAGACCCACTTCGGCACGATCATAACACATTATGACATTATAGGCTTGTAACTAAAATGTGTACCTAACCTATTTCTGTTGCTCATAAAGACTGTCAAGCTTCATTAATTGTCACTCATAATCATCTCAAGATGTGCTTGTATAGTGCATTTAGAGGATTTTACTCCACTGCTTTTTCTCACACGAATTCATCACATCCAACACTCTGGCTCTTTCTCTGTGCTCTCAATGACCCAACGTCAGTCAGTCAGAACATTCAAGGAATCATAACCAGTGTTTCTGTTCTCGCTCCACTCCACACCATCATAGCAAAACAACTTCATCCTATCGATAGGATGAAACTAATTGGAGTATACCGACAAACACGCTTACAAAACTAAAACCTGCTCCACTTTATTGTCTGTTGTGGATTTATAAACTAAAATGAATCCATCTAAAAGGAGGATGTCAAAAGCGAAGAATACACTAGATTTAGGCAAGTTTAAAGTTTCAAGGTTTTGATGAAGTTTTAATTTCAACTTGCCTTTTAAATCAATTAAAATACACTGCATCTGTTTTTGATAGTTTGGTAGCTTATTTTTATTGATTAAAATGTAGCCAGAATAAAAGCCTGTTCACACCAACATGAACGTTCAGAACAGTCAGATTTTCTTGTGTTTAGAAAAATGCTTTTAAAACCACAAACGGCCTGAATAAAATTGTCATTTCACTCTTTGACAGTCGTGGCACTTTTGGAAAAGCAAGAAATACTTGTTTTACCACGCTTTACACAAAGTGCTATGCAACTTTTTGTAGGTCTGCAACTTTTTGCAGGTCTGTCTTTAGCACTTTATAAGTTATTGTTAAAATAATTAAGCTTATTTTTGCCACGGAATAAAAAAGGAAATTGAAACTTTTTATCTCTCACAGTTTATATCTCACAATTCTGACTTTTCAGACAAAAAAGTCAGAATTCATGATGTTAACTTGCATACACTCACAATTCTGAGAAGTAAAGTCCAAATTGTGAGATATGACCTAAAAAAAAAAAAAAAAAAGTTTTTTTAATTTTTGTATTTCATGGCGAGGAAAAAAACTTCAAGATGTAAACTGAAAATTCCAAGAAAAAAAAGTCAGTTTTGCAAGAGAAAATTAATGGGATTTTTTTACTTCCGGAAACCAAACTGTACACTGTTTGTGAGCGCCACCAAGTTGTAGCTTTATGTAACAGTGGCAGCGGCTCTGAGCATGTGACCAAAAGTATTTCGCAGTGCGATGGCTAAGAGATCAGAAAACTTCTCTGTAAAAATACAAAAATTCTGTCGCATTGATGGAACATGAATGTTCATGTCAGTCTGAAAGCATTACCAGCCATTCAATCAAATTAAAATGTTTATCGCACTAAATACTTGTCTTGGTGTGAACAGGCCTTAAAAATGGATGAAATTACTTCTGTTGTACCTCAAATTAATTTCCACGAAAGTGTATACTGGTTAAGACCAAACCTCATTAAAAAAGCTTACAAGCTAACAAAGAGTTATGTTTAATTACAAATAAGAGGTCTTTAACTTGCTACTCCCAATATATTTGTAATTAGAATGGGTTTTATTTTAAAGTACTTAACAGAATGCGTTTGATGGGATGATCCTCCTTTTGGTTGTAGGGCTCAAGGAGTATTATATATATATTATTATTATTATTATTATTACTGAATTACTGAATCTATGGAAGTGAAGCTTTCTGTACTGCCCCAATCCCAAGAAAGCTTCTCAAGGACACATGGGCAGAAGGCACTTTAAAACCATTTCCTCTCCAAAAATGTAATTTAATCACTGATTCTTAGTAAGCAAACATAAAATTGCTATCTGGTTCTGCTTGATTAAAAAAAGCATATGATCACTCACGAGAAAAAAAAAAAAAATCATCCAGCTGACTGTATGATTTACAGACCAGTGTATCATCTGACAACACTAGGGGGAGTACAGTTACAAAACGCCCAACAACCATTAGGACTCATTTACTACCACAATATATCAACTTGCACCTGATAATTTCCTCAAAAATCTGTAATCATACCCAGGTGTTTTCACAAGAGGGTTTTTCCGTTCCTTTTTTGCTTGCGTCTGTTGAATAACCTGCTTTGCCCCTTTGAAACCGTTCTAAGCGAGTGAAAGTTCCTGTGCGCGTCGTTGCTTTGGGATCACATTTGTTTTGCTCTGGATCTTAACGGTTCGCTATAGCTATGCATCATTCTCATGTTAAAAGAATCAAAAATAAAGCAGGAAGCACCAATACCAGCCCACAGAAACCATTAAGATGCCAGACTTCAGTTCTGTGGTGTAAAATCTCAAATAAAAGTACACAATCGTTGATGGCTATTTATTCTCACCATGACGACTAGCTTTTAAGAGGCAGATTAGAAGCTAAAAGGACTTCAGAGTCCCTCGACCACATCTGATATATAAAAAAAGGTTTGTTTCACATCATCTACAGGACTCACATAGAGAGGAATCTATTCATATGGTTGGCAGAAGCGAACTACCAAACAAATACACAGTGACATAAAGGTGCGTTCACGCCATGTCGTTATTACTGTAATTTCGGTATAGCTCAGAATAGAACATCACGTGTTGTCATCTCGATATTACGGTAATTACGATATGTCGTGAATGCAGCATAACAGCTAAAAGATTGATTATCAACAGCTGCAATCATTCCTCATCTCATCCCTGGCCCGTGTCCTAATCGAAAATATCCAGGACTACGACACTAGTTCGAGCTTTCATGGAATCATGAGACACTTTCTTCTCTCTTTTGTTGGGACAACAAATACTCAAGCTGTGATATTACCGTAATTACTGCAGCTGACTTTGATTGATAGAGAAAACTATGGGCTTACAAAAAAGCCGTACGTTTACTTACGATAATATACTGTGCTTATCTGTTCTCTATGATAAACATAAAAGTTTGGTGTTAGTATAATTTGCTCTGTATAATGTGCTTAATCATGCTTTTATATGCGTGTCCTCTGACGTCTCGTGTCGGGGTGCTCATCTAGGCGGCTGTGCGAGGACCGGGTAGGCCAGGGTTACATTCAGTGAGTCGTTGTGCTGGACCAGAGAGGTGTGTTTGTAGTGCAGGACCAAGTCTTTCAAGGAACCATAAAGGTTGTAGGGCTCAGCAAATCCAAAACCTGTGGCTGTCTTGTAAACCATGCAATGCTTGATCTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33468 True 4702 lncRNA 0.36 2 7899358 7904097

Neighbor

gene id symbol gene type direction distance location
CI01000004_07829094_07830772 NA coding downstream 68545 7829003 ~ 7830813 (-)
CI01000004_07805884_07817962 CRTC1 coding downstream 80422 7805653 ~ 7818936 (-)
CI01000004_07792267_07797908 CRSP7 coding downstream 100896 7791898 ~ 7798462 (-)
CI01000004_07784930_07788318 CNN2 coding downstream 110851 7783684 ~ 7788507 (-)
CI01000004_07755406_07758041 NA coding downstream 141317 7755167 ~ 7758041 (-)
CI01000004_07960123_07960701 NA coding upstream 56007 7958746 ~ 7961208 (-)
CI01000004_07998445_08008810 HLTF coding upstream 94136 7997249 ~ 8008810 (-)
CI01000004_08010634_08013275 NCK1A coding upstream 105762 8009859 ~ 8013275 (-)
CI01000004_08030758_08033803 SLC35G2, SLC35G2A, SLC35G2B coding upstream 126414 8030511 ~ 8033803 (-)
CI01000004_08049634_08054074 NA coding upstream 145040 8049137 ~ 8054511 (-)
G29610 NA non-coding downstream 62540 7834816 ~ 7836818 (-)
G29608 NA non-coding downstream 77295 7821842 ~ 7822063 (-)
G29552 NA non-coding downstream 95130 7800957 ~ 7804228 (-)
G29556 NA non-coding downstream 98606 7800447 ~ 7800752 (-)
G29542 NA non-coding downstream 99077 7798550 ~ 7800281 (-)
G29663 NA non-coding upstream 119854 8023951 ~ 8025200 (-)
G29750 NA non-coding upstream 433072 8337169 ~ 8339546 (-)
G29388 NA other downstream 1267451 6631293 ~ 6631907 (-)
CI01000004_06539836_06541252 NA other downstream 1353786 6538904 ~ 6541252 (-)
CI01000004_05617072_05627369 NA other downstream 2271844 5616644 ~ 5628289 (-)
G27746 NA other downstream 2695634 5178227 ~ 5203724 (-)
G26788 NA other downstream 4623637 3267683 ~ 3275721 (-)
G29656 NA other upstream 60267 7964364 ~ 7965500 (-)
G29746 NA other upstream 450401 8354498 ~ 8358127 (-)
G30316 NA other upstream 1473840 9377937 ~ 9406921 (-)
G31203 NA other upstream 2842340 10746437 ~ 10750641 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 3503368 11406957 ~ 11412907 (-)

Expression


Co-expression Network