CI01000004_08030758_08033803 (SLC35G2, SLC35G2A, SLC35G2B)


Basic Information

Item Value
gene id CI01000004_08030758_08033803
gene name SLC35G2, SLC35G2A, SLC35G2B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 8030511 ~ 8033803 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_08030758_08033803.mRNA
GTCAAGTTGTACTGCGCCAATGACATGCTCCTCCTGAATGATGACGCACGCTTAGAGCAAATGCTCCTCATCATATTCCATGCAGCTCGACTGAGATCTCAGAGTCCAGTACCAAGCATCCCTGCGAGGAAAGCCACTGAGCTACACGACAGCTGGTATTGTAAGAAAATGGAGGATTCACCAACAAAACATCTGCTTGGCTCAAAGAAGCGAGTCAAAATCCACCCGAACACAGTGACAGTCAAATACGCCACTCATTTCCCCCAGCCTGGAGACGAGGGCTATGATGACGCTCCATCTTTTGAAGACTTCGGCTCATTTGTCGAAGAGACCTCAGATAGAAAGAGTCTTACCGACAGCAAATCGGGCAGGACTTTTTTTGGTGCGCTTGACAGTCGGTCCAAACCAACTGGGGACCAAAAAGACAAAGGGGTCGGAGGTCAGCTGCAGAGCTTCGGGGAGGCCTCCGTGTTCACCTCACGTATGACGTGGGCCGCTTTGTTCGGGGCGGCTCTGGCCCACGGCTGTGTGGCTCTCATCACACGCCTGGCTGCCGACTGCTCTAGGGTGCCGTCGCTGGAGCTTCTCTTCATCCGCTCGGTCATCCAGGTGTTGTCCATTGCAGTGGTGTTTTATAACCAGGAGCCTCCCTTCGGCCCCCAAGGCTACAGACTGCGTCTTTTCTTCTATGGCGTGTGCAATGTCATCTCCATCACGTGTGCGTATACCTCCTTTGCCATCGTGCCACCCAGCAACGGCACCATCATGTGGAGGGCCACCACAACGGTCTTCAGCGCCATACTGGCATTTTTACTCATCGATGAGCGACTGGGCATGACAGATGTGGTGACGGTTGTCAGTAGCGTCTTCGGCCTCTGCTTGGTCATGATTCCCAACATCTTAGGTGAGCACAGATCTCTGGGTTTCTGGAAGGAGGCTTTTGGCTACACCATGACGGTGATGGCGGGCTTAATGGCGGCCTTGTCCATGATCATATACCGCGCTATCAAAGAAAAAGTGAGCATGTGGACAGCACTTTTCACCTTTGGCTGGACCGGAACGGTGTGGGGAGTGTCAACTATGTTCATCCTGCAGGAGCCCATCATTCCACTGGACGGAGAGACGTGGGGCTATCTAATTGGCATCTGCGTCTGCTCCACCGTGGCGTTCCTGGGGGTATATTACGCCCTCAACAAGTTCCATCCAGCACTGGTTAGCACCGTGCAGCATATGGAAATTGTTGTGGCAATGCTTCTGCAGCTGATTGTGCTCCACATGGTTCCTTCAGTGTATGACATCATTGGGGGCGTCGTCATCATCATCAGTGTTGTCGTGCTGACGGCTGTAAAGCTTTACTGGGTGGGCAAGAGCAAAAGACAGGAGTATGAAGAGATCCTTGATTCTCCGATAAAGTGAATCAATTACAAAGTTATTGTTTTATAAATATTTTTGTGGAGTTTGATTTTTCAGGCCTTGAATTAATGCCACCTGTGATTGAGGTTATTGTGAATCAATGTGAAGTTTTTGTCTATTGATGAAGTGCCATTGTGAAGTTGTCTTTGACTGCTGTATTATGTGAAGCTCAAAGAGGTTATTGATTTTTATTGCCCATTATTAAGTATTTATCATGTCAAACATGTTTGGTTATGTGCATCCAAATAAA

Function

symbol description
slc35g2b Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in cranial ganglion; diencephalon; telencephalon; and trigeminal placode. Orthologous to several human genes including SLC35G2 (solute carrier family 35 member G2).
slc35g2a Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human SLC35G2 (solute carrier family 35 member G2).
slc35g2 Located in Golgi apparatus and plasma membrane.

GO:

id name namespace
GO:0003674 molecular_function molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_08030758_08033803.mRNA True 1663 mRNA 0.49 2 8030511 8033803

Neighbor

gene id symbol gene type direction distance location
CI01000004_08010634_08013275 NCK1A coding downstream 17236 8009859 ~ 8013275 (-)
CI01000004_07998445_08008810 HLTF coding downstream 21701 7997249 ~ 8008810 (-)
CI01000004_07960123_07960701 NA coding downstream 69648 7958746 ~ 7961208 (-)
CI01000004_07829094_07830772 NA coding downstream 199698 7829003 ~ 7830813 (-)
CI01000004_07805884_07817962 CRTC1 coding downstream 211575 7805653 ~ 7818936 (-)
CI01000004_08049634_08054074 NA coding upstream 15334 8049137 ~ 8054511 (-)
CI01000004_08103263_08106420 PCCB, PCCB.L coding upstream 69460 8103263 ~ 8106420 (-)
CI01000004_08113788_08117378 NCEH1A coding upstream 79571 8113374 ~ 8118079 (-)
CI01000004_08233410_08241216 NA coding upstream 199375 8233178 ~ 8241319 (-)
CI01000004_08249849_08251049 NA coding upstream 215865 8249668 ~ 8251307 (-)
G29663 NA non-coding downstream 5311 8023951 ~ 8025200 (-)
G29562 NA non-coding downstream 126414 7899358 ~ 7904097 (-)
G29610 NA non-coding downstream 193693 7834816 ~ 7836818 (-)
G29750 NA non-coding upstream 303366 8337169 ~ 8339546 (-)
G29829 NA non-coding upstream 325100 8358903 ~ 8359102 (-)
G29833 NA non-coding upstream 335347 8369150 ~ 8371242 (-)
G29844 NA non-coding upstream 376923 8410726 ~ 8411219 (-)
G29656 NA other downstream 65011 7964364 ~ 7965500 (-)
G29388 NA other downstream 1398604 6631293 ~ 6631907 (-)
CI01000004_06539836_06541252 NA other downstream 1484939 6538904 ~ 6541252 (-)
CI01000004_05617072_05627369 NA other downstream 2402997 5616644 ~ 5628289 (-)
G27746 NA other downstream 2826787 5178227 ~ 5203724 (-)
G29746 NA other upstream 320695 8354498 ~ 8358127 (-)
G30316 NA other upstream 1344134 9377937 ~ 9406921 (-)
G31203 NA other upstream 2712634 10746437 ~ 10750641 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 3373662 11406957 ~ 11412907 (-)
G32150 NA other upstream 3742716 11776519 ~ 11780951 (-)

Expression


Co-expression Network