LOC122349840


Basic Information

Item Value
gene id LOC122349840
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 15223896 ~ 15224033 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251533.1
GTTTTGTGATGATCTCCATGCGTGTCAACTGATCCCAGACTTCCTGCAGTGTTCTGTGTCTGATAAGCGTTTTGCTTAGCTGTGCATTTGAGCCTGTAGGACTCTtgggaacatgatctttacttttgGTCTGAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251533.1 True 138 snoRNA 0.44 1 15223896 15224033

Neighbor

gene id symbol gene type direction distance location
sox19b sox19b,LOC107750560,LOC107561748,LOC107754704,LOC107704253,LOC107593644 coding downstream 5811 15214875 ~ 15218085 (-)
mblac1 mblac1,LOC107563023 coding downstream 18677 15203938 ~ 15205219 (-)
tm4sf21b LOC107750658,LOC107563293,LOC107666286,LOC107687041,LOC107754707,LOC107593686 coding downstream 21294 15200619 ~ 15202602 (-)
LOC122348084 LOC107666288,LOC107750659,LOC107563299 coding downstream 23400 15197905 ~ 15200496 (-)
her8a LOC107750660,LOC107563304,LOC107666285,LOC107754663,LOC107687047,LOC107593669,LOC108262021,LOC105027206 coding downstream 29840 15191548 ~ 15194056 (-)
senp3b senp3b,LOC107750558,LOC107704250,LOC107754702,LOC107561728,LOC107687035,LOC107593615 coding upstream 4408 15228441 ~ 15232986 (-)
si:dkey-62k3.6 NA coding upstream 22115 15246148 ~ 15252741 (-)
plscr3b plscr3b,plscr3,LOC107593564,LOC107754701,LOC107687051,LOC107561702 coding upstream 29188 15253221 ~ 15261552 (-)
phf23b phf23,LOC107687030,LOC107687050,LOC107561685,LOC107593540 coding upstream 42854 15266887 ~ 15272330 (-)
si:ch211-107p11.3 si:ch211-107p11.3,LOC107750654,LOC107586032,LOC107688174,LOC107754692 coding upstream 271839 15495872 ~ 15498178 (-)
G53121 NA non-coding downstream 269324 14952192 ~ 14954572 (-)
G53119 NA non-coding downstream 273262 14947805 ~ 14950634 (-)
G53118 NA non-coding downstream 278881 14943010 ~ 14945015 (-)
G53091 NA non-coding downstream 303018 14839197 ~ 14920878 (-)
G53276 LOC101886486,LOC101886504,LOC101886427 non-coding upstream 114043 15338076 ~ 15342768 (-)
G53307 NA non-coding upstream 275888 15499921 ~ 15503896 (-)
G53309 ext2,LOC107750554,LOC107586005,LOC107754691 non-coding upstream 285147 15509180 ~ 15509681 (-)
G53326 rps13,LOC107586033 non-coding upstream 385453 15609486 ~ 15611883 (-)
G53338 NA non-coding upstream 461598 15685631 ~ 15686068 (-)
rnaseka rnaseka,rnasek,LOC107750577,LOC107561913,LOC107678101,LOC107749794,LOC107594736,LOC107669181 other downstream 248728 14973703 ~ 14975168 (-)
G52917 LOC105896813 other downstream 1078616 14144506 ~ 14145280 (-)
LOC122347917 LOC107738092,LOC107683518,LOC107548777 other downstream 1133455 14075543 ~ 14090441 (-)
G52897 LOC107558424,LOC107731920 other downstream 1150197 14069113 ~ 14073699 (-)
LOC122347915 NA other downstream 1155396 14065015 ~ 14068500 (-)
nrn1lb nrn1lb,LOC107750645,LOC107586039,LOC107594653,LOC107741430 other upstream 1336385 16560418 ~ 16564338 (-)
G53797 tpm1,LOC103462590 other upstream 1657860 16881893 ~ 16934252 (-)
serf2b NA other upstream 1822411 17046444 ~ 17048041 (-)
LOC122349446 arl14ep,LOC107663944,LOC107740492,LOC107554899,LOC107700465,LOC107755038 other upstream 3442240 18666273 ~ 18669833 (-)
G54312 LOC107663979,LOC107557712,LOC107740422,LOC107700467,LOC107553073,LOC107755077,LOC108430810 other upstream 3518127 18742160 ~ 18794207 (-)

Expression


Co-expression Network