G62488


Basic Information

Item Value
gene id G62488
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 9711482 ~ 9711700 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU92506
CAAACCAATTGAATTTATTACAGAGTTGGCAGACTGCTGTGtgtctctggtgtgtgtgtgtgataagaGAGTAATATTACGGGGATTACTGTGAGATGGTGGgccctggggctgctggatgaGGGTGCGGGGGAGGAGGGGCTGTTTCCTGGCTGTAGCCCTTGTTTGTCTGCCTGACCTGGCAGCACTAGGGGCAGATCCTGCTTGGATACAACCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92506 True 219 lncRNA 0.53 1 9711482 9711700

Neighbor

gene id symbol gene type direction distance location
slc35a3a slc35a3a,LOC107717552,LOC107585865,LOC107695244,LOC107676659,LOC107548839,LOC108230529 coding upstream 11107 9694252 ~ 9700375 (+)
notch2 notch2,LOC107585864,LOC107750854,LOC107717553,LOC107548805,LOC107695243,LOC107676634 coding upstream 17747 9656780 ~ 9693735 (+)
si:ch73-281k2.5 LOC107585863,LOC107717553,LOC107548805,LOC107585864,LOC107695243,LOC107750854 coding upstream 64472 9633309 ~ 9647010 (+)
sec22bb sec22bb,sec22b,LOC107548814,LOC107676649,LOC107750823,LOC107585928,LOC108439390,LOC107700221 coding upstream 82294 9624941 ~ 9629188 (+)
npl npl,LOC107676614,LOC107717554,LOC107750814,LOC107700206,LOC107548793 coding upstream 87152 9619169 ~ 9624330 (+)
foxe3 foxe3,LOC107717545,LOC107550406,LOC107751110,LOC107676976,LOC107695226,LOC107578878 coding downstream 1420 9713120 ~ 9714916 (+)
foxd2 foxd2,LOC107717544,LOC107585929,LOC107676984,LOC107751117,LOC107550413,LOC107695227 coding downstream 6410 9718110 ~ 9720723 (+)
znf692 LOC107676681,LOC107717549,LOC107750903,LOC107585870,LOC107695246,LOC107548858 coding downstream 145040 9856740 ~ 9862896 (+)
fcho1 fcho1,LOC107717548,LOC107676711,LOC107548880,LOC107695209,LOC107585913 coding downstream 151499 9863199 ~ 9900462 (+)
acsbg2 acsbg2,LOC107731199,LOC107676759,LOC107695249,LOC107750933 coding downstream 222420 9934120 ~ 9953144 (+)
G62487 NA non-coding upstream 1111 9710137 ~ 9710371 (+)
G62486 NA non-coding upstream 1357 9709846 ~ 9710125 (+)
G62485 NA non-coding upstream 2389 9708830 ~ 9709093 (+)
G62484 NA non-coding upstream 3647 9707333 ~ 9707835 (+)
G62481 NA non-coding upstream 63602 9647655 ~ 9647880 (+)
G62489 NA non-coding downstream 261 9711961 ~ 9712162 (+)
G62490 NA non-coding downstream 503 9712203 ~ 9712513 (+)
G62573 NA non-coding downstream 16365 9728065 ~ 9728774 (+)
G62574 NA non-coding downstream 19077 9730777 ~ 9731011 (+)
G62613 NA non-coding downstream 268921 9980621 ~ 9981474 (+)
G62483 fam78bb,LOC107717547,LOC107676968,LOC107585866,LOC107751100,LOC107550401,LOC107695225 other upstream 5843 9704481 ~ 9705639 (+)
smim15 smim15,LOC107700545 other upstream 1233151 8477171 ~ 8478331 (+)
soat1 soat1,LOC107549691,LOC107700347,LOC107657858,LOC107758003 other upstream 2182396 7306119 ~ 7529086 (+)
G61713 LOC107550213,LOC107755291,LOC107599058,LOC107700515,LOC107757991,LOC107665059 other upstream 2861771 6848481 ~ 6849711 (+)
G61678 LOC107665067,LOC107598994,LOC107757984 other upstream 2944939 6756105 ~ 6766543 (+)
col2a1a col2a1a,LOC107585898,LOC107668081,LOC107695274,LOC107549173,LOC107731244 other downstream 637214 10348914 ~ 10367863 (+)
G62692 cry1ba,LOC107578471,LOC108441644,LOC107668038,LOC101164536,LOC108265656,LOC103358259 other downstream 720102 10431802 ~ 10478799 (+)
fhad1 LOC107731229,LOC107695278,LOC107550056,LOC107667985,LOC107555592,LOC107745840,LOC107745827 other downstream 824443 10536143 ~ 10551791 (+)
LOC122350428 LOC107668044,LOC107731208,LOC107555595 other downstream 1481024 11192724 ~ 11197803 (+)
G62940 LOC107668028,LOC107745767,LOC107695299,LOC107549994 other downstream 1583105 11294805 ~ 11311433 (+)

Expression


Co-expression Network