G62613


Basic Information

Item Value
gene id G62613
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 9980621 ~ 9981474 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU92683
CTGACATGCCCTGATCAGGCACATTGAGGAAGTCAAGGTTTGTGGACTGATTCTGGGCAGGCCTGGAGCCTCTTCGATTCTTCTGCGATCCCAGTTTAGGAAGAGCATTGCTGGGCGGAGGGTTCCTCATCGGTGTAGAGTACATTACTTCCCTCTGCTGCTGCGGCTGATGGTGCTGTTGAGCACCACCCCGGGCAAACTGTGCTGCCCCATTCTGATGGCCCCCTGTGATGAAAATCCTCTTTGCCGTGGCTGGTTTCTTCCTCCGTGACTCTGTGGCATGCCTTTCCTGGTTGGctctggagaaaaacaaaatgtacatgCAGTGAAGCTCAATGAACGGTTTTCCTGTCGCTGCTGACgctcattcatccatccatctcacTTACTGGATGTTTTCGGCAGTCCATCTCCTATTGAGACAGAAAGagtctttcctccaggtttgatGACGGCTAAATCAGTCTGTCCCCTCTGGACAACCACCATACGTGTGCCTCCTCCTCCCCAGCCCTCCTTCTTCACTCGGAACTCCAGCCTACAAATCACcagtattcatttattctctGCACTGGAATGAGTCTAATGCTGTGATTGAGTTATCAGCACCTGTCGCTGAAGGACAGAGAGAGTTTGCTTCGGGTCTGCTCCTCGTAACGCTTGCAAAGCAGACTGAGGAACTCTGTCTTAAATGTGGACTCCAGGAGACTGTCGTACTCGTTCTCGTGAAGGATGAAGAAGTCGTCTTGCCTTGTGCTGGAGGGAAACGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92683 True 771 lncRNA 0.51 2 9980621 9981474

Neighbor

gene id symbol gene type direction distance location
acsbg2 acsbg2,LOC107731199,LOC107676759,LOC107695249,LOC107750933 coding upstream 27477 9934120 ~ 9953144 (+)
fcho1 fcho1,LOC107717548,LOC107676711,LOC107548880,LOC107695209,LOC107585913 coding upstream 80159 9863199 ~ 9900462 (+)
znf692 LOC107676681,LOC107717549,LOC107750903,LOC107585870,LOC107695246,LOC107548858 coding upstream 117725 9856740 ~ 9862896 (+)
foxd2 foxd2,LOC107717544,LOC107585929,LOC107676984,LOC107751117,LOC107550413,LOC107695227 coding upstream 259898 9718110 ~ 9720723 (+)
foxe3 foxe3,LOC107717545,LOC107550406,LOC107751110,LOC107676976,LOC107695226,LOC107578878 coding upstream 265705 9713120 ~ 9714916 (+)
LOC122351119 zap70,LOC107585931,LOC107695253,LOC107676994,LOC107745809,LOC107731183,LOC107548917 coding downstream 62602 10044076 ~ 10053387 (+)
mob3a LOC107585875,LOC103368804,LOC107695254,LOC104921817,LOC107731185,LOC103137270,LOC101067073,LOC100699828 coding downstream 72606 10054080 ~ 10058943 (+)
mknk2b mknk2b,mknk2,LOC107585877,LOC107731184,LOC107695256 coding downstream 82271 10063745 ~ 10076983 (+)
rexo1 rexo1,LOC107585876,LOC107731267,LOC107745805,LOC107548912,LOC107695255 coding downstream 97812 10079286 ~ 10089311 (+)
zgc:101100 zgc:101100,LOC107677009,LOC107731167,LOC107745807,LOC107585932,LOC107695257,LOC107549997 coding downstream 114532 10096006 ~ 10098635 (+)
G62574 NA non-coding upstream 249610 9730777 ~ 9731011 (+)
G62573 NA non-coding upstream 251847 9728065 ~ 9728774 (+)
G62490 NA non-coding upstream 268108 9712203 ~ 9712513 (+)
G62489 NA non-coding upstream 268459 9711961 ~ 9712162 (+)
G62488 NA non-coding upstream 268921 9711482 ~ 9711700 (+)
G62631 NA non-coding downstream 14097 9995571 ~ 9997484 (+)
G62685 NA non-coding downstream 155181 10136655 ~ 10137222 (+)
G62684 NA non-coding downstream 155849 10137323 ~ 10139265 (+)
G62686 NA non-coding downstream 160048 10141522 ~ 10141884 (+)
G62688 NA non-coding downstream 165393 10146867 ~ 10147082 (+)
G62483 fam78bb,LOC107717547,LOC107676968,LOC107585866,LOC107751100,LOC107550401,LOC107695225 other upstream 274982 9704481 ~ 9705639 (+)
smim15 smim15,LOC107700545 other upstream 1502290 8477171 ~ 8478331 (+)
soat1 soat1,LOC107549691,LOC107700347,LOC107657858,LOC107758003 other upstream 2451535 7306119 ~ 7529086 (+)
G61713 LOC107550213,LOC107755291,LOC107599058,LOC107700515,LOC107757991,LOC107665059 other upstream 3130910 6848481 ~ 6849711 (+)
G61678 LOC107665067,LOC107598994,LOC107757984 other upstream 3214078 6756105 ~ 6766543 (+)
col2a1a col2a1a,LOC107585898,LOC107668081,LOC107695274,LOC107549173,LOC107731244 other downstream 367440 10348914 ~ 10367863 (+)
G62692 cry1ba,LOC107578471,LOC108441644,LOC107668038,LOC101164536,LOC108265656,LOC103358259 other downstream 450328 10431802 ~ 10478799 (+)
fhad1 LOC107731229,LOC107695278,LOC107550056,LOC107667985,LOC107555592,LOC107745840,LOC107745827 other downstream 554669 10536143 ~ 10551791 (+)
LOC122350428 LOC107668044,LOC107731208,LOC107555595 other downstream 1211250 11192724 ~ 11197803 (+)
G62940 LOC107668028,LOC107745767,LOC107695299,LOC107549994 other downstream 1313331 11294805 ~ 11311433 (+)

Expression


Co-expression Network