gnai3 (gnai3,LOC107731160,LOC107679171,LOC107668041,LOC107550494,LOC107591822,LOC107711987,LOC108442115,LOC108265813)


Basic Information

Item Value
gene id gnai3
gene name gnai3,LOC107731160,LOC107679171,LOC107668041,LOC107550494,LOC107591822,LOC107711987,LOC108442115,LOC108265813
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 12263664 ~ 12275773 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246539.1
GTCAGTCACGCGCTTCAAACGGGAGAGCCACCGGAGAACGAGTCAATGCGCGCAACGAGAACGATTCgttcatttaaaagatttgttcaaaaacaccgATTCGTTAGGGGCTCTAACTGCGATCCACCGCGAGACATTTAGCTACATGTTTTGGATACAGTCTTGGATACCGTTTTTGCGTGAAAAAAACTTAAACCGGCGTTCAACAGCAGACCGCAGAACACCAGCGGTGGAAACTTTTTAGTCACGGAAACATTGTTCATCTGGCTTTGTGGTTTTGGATCCTCTGCTCTGTCCCCGACCGATGTAGTTTCGGTGGATCTCGGTCCGGTTTAAGCTCGATGTTACAAGACCCCGccgtttaaatatgttttaaagtatCTGTTTTCATACGCTGGCATCGTCTCGTGCGAACCCGCCAACGCCTTTTCTCTGCTCGGCTTCGTTATCCGTCAAGGTGAAGGAACATTACCGCAACGTCCAGTTTTAAAGGTTCCCTTTAATCGTTTATAAACGTTTTGCAAAATGGGTTGCACGTTAAGTGCTGAAGATAAAGCAGCGATGGAGAGGAGTAAGATGATTGACCGGGACCTGCGGGAGGACGGAGAGAAAGCATCCAGAGAAGTCAAACTACTGCTGCTCGGTGCTGGGGAATCGGGGAAGAGCACAATAGTGAAACAAATGAAGATCATTCATGAAGATGGCTACTCGGATGAGGAGTGCAAGCAGTATAAAGTCGTAGTTTATAGCAACACTATTCAATCCATCATTGCCATTATTAGGGCCATGGGCCGCTTAAAGATCGACTTTGGGGATCCTGCAAGAGCgGACGATGCTCGGCAGCTCTTTGTCCTCGCCGGCACTGCAGAGGAAGGAGTCATGACCCCTGAGCTCTCTGGGGTCATCCGCCGGCTGTGGAAGGACGAAGGAGTACAGACGTGTTTCGTTAGATCGCGAGAGTATCAGCTCAATGATTCAGCAGCCTACTATCTAAACGACCTGGATAGGATATCCCACCTCACCTACATGCCCACTCAACAAGATGTGCTGAGGACTCGAGTCAAGACCACTGGCATTGTAGAAACACACTTCACCTTCAAAGAGCTCTACTTCAAGATGTTTGATGTTGGTGGCCAGCGTTCAGAACGGAAGAAATGGATCCACTGTTTTGAAGGTGTCACTGCTATTATCTTCTGCGTGGCGCTCAGCGACTATGACCTGGTGCTAGCTGAGGATGAAGAGATGAACCGTATGCATGAGAGCATGAAGCTTTTTGACAGCATCTGCAACAACAAATGGTTCACAGACACATCCATCATTCTCTTCCTCAATAAGAAGGATCTGTTCGAGGAGAAGATCAAAAGGAGTCCACTTACGATATGCTACCCAGAATACTCTGGAACAGACACTTACGAGGAGGCAGCAGCATACATCCAGTGCCAGTTTGAGGATCTGAACAGAAGAAAGGACACAAAGGAGATCTACACACACTTCACTTGTGCCACGGACACCAAGAACGTACAGTTTGTGTTTGATGCGGTCACTGATGTGATCATCAAGAATAACCTCATAGAGTGTGGCCTCTATTGAAGCAACATCTGTCTGATAAGttATTTATGGAAGATTTCCGAAGTTCACTGACTGGTTTCTTCTGTTGGCGAACGAACAAGAGAGACTTCCTCCCCGCTGCATGCACTCTTTACACTAAATGCAGTACCTAAGCCCATGGACATTTTCCTCCCATATCCTTCTTAATAACAGTCTGTTATGgacattatttcttttttgttactttattgCCATTACAGCTTCATTCTGTTCACTATGCATTAATCATAATCCACAACTGACAGTAATATGTGTCTATATACTAACCTCAGTTGCATCCAATatctttgtttagtttttttttttaacacaacagACAGCGAGATTTTGATCTGAGtgcttttaataacaatatCAGTTCTTATTTGAAAGTtagctaatttaaaaaatttttaaagttagctattgtattaatttttaggACTGTATTTAagtttgcatatatttgcatactTCCCCGAATTAAGCAGCTAGTGTGGGAACTATTGTTGTATATTGTGTTATACCTTTAGTAATTCACAGCCCAAATCACACAGCAATAGGAcgccatttattttttcattaattaggCATGGATCGTTTTATATAACGCTTCATACAACCCACTATTTTTGTATCTCTTGAAGACCAGTAAAGATgtgaacaaatgtttttctcacagATACATTTCTGAATGGTTCAGAAATAACGACTCTGTTGGGTCAAGAACACGATGGCCAGATTTTCATTCTTGATGGGGTACAAATTTTACAAGACTTGTTTGATGTGCTTTTGTTTAATCCTGTggatttcagtatttttaaacaaattgacACAATGTGATCTGGtttttaatacatgtatttaatattgaaatgtGCTGACATCAAGTCAGATGTTGCTTCCAGAACATGCCAAACAGCCAGAGTTACCAGCACGAGCAAGACAGACACGATCTGtatattactaaaaaaagtaTAGTATTCCAATTAGAGTACATTCATGTACTCAGTCTGTATTCATGCAACAATCTGTGAATTCTTTTCTATATCactgtgcattattttattaaactattttagcTATAGTGCAGTTGAACATCTAGCTTTAATGATAGCACTGAATCACTAATATGCTAACAACCTGATTTGTTTAGCTTTCTGAAAACCCTTTTGTTGATTATAACTTAAAACCTGTTGTTTTATGGGCTTTTCTGATCACATGTAACTCTGCAAAACACAATGTCAACAATTTCCACAGATTTGagaatatgcatatataatcaAATTGCAAAAGAGTATATACATAATCACGATcagaaataatttacattttagtctttGATGTTCAAACGGTAAATGCAAATTTTAACAAAGAATCAtacctaaatatattttgtcttgttttaatgaGA

Function

symbol description
gnai3 Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Predicted to be involved in adenylate cyclase-modulating G protein-coupled receptor signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be part of heterotrimeric G-protein complex. Is expressed in barbel; brain; gill; lip; and sensory system. Orthologous to human GNAI3 (G protein subunit alpha i3).

NR:

description
PREDICTED: guanine nucleotide-binding protein G(k) subunit alpha-like

GO:

id name namespace
GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0031683 G-protein beta/gamma-subunit complex binding molecular_function

KEGG:

id description
K04630 GNAI; guanine nucleotide-binding protein G(i) subunit alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246539.1 True 3001 mRNA 0.40 9 12263664 12275773

Neighbor

gene id symbol gene type direction distance location
gpr61 gpr61,LOC107711990,LOC107680283,LOC107591819,LOC107550469,LOC107731157,LOC107668011 coding upstream 3450 12252231 ~ 12260214 (+)
atxn7l2b LOC107668112,LOC107550490,LOC107731254,LOC107711991,LOC107591815 coding upstream 35165 12220892 ~ 12228499 (+)
sypl2b LOC107550468,LOC107668009,LOC107711993 coding upstream 45195 12215778 ~ 12218469 (+)
ngrn LOC107550488,LOC107668094,LOC107711999,LOC107736076,LOC107731126 coding upstream 63871 12197268 ~ 12199793 (+)
slc6a17 slc6a17,LOC107668054,LOC107731213,LOC107678997,LOC107712000 coding upstream 128935 12115904 ~ 12134729 (+)
ampd2b ampd2,LOC107668035,LOC107550495,LOC107679126 coding downstream 10904 12286677 ~ 12305712 (+)
gstm.1 LOC107550498,LOC107591812,LOC107679185,LOC107679206 coding downstream 30430 12306203 ~ 12308908 (+)
LOC122350230 LOC107591812,LOC107550498,LOC107679185,LOC107679206,LOC107550499 coding downstream 37874 12313647 ~ 12315719 (+)
LOC122350181 LOC107731189,LOC107668014,LOC107550472,LOC107711983,LOC107679230,LOC107591808 coding downstream 52771 12328544 ~ 12334608 (+)
dnase1l1l dnase1l3l,LOC107731190,LOC107668021,LOC107550473,LOC107591809,LOC107711985 coding downstream 59074 12334847 ~ 12337129 (+)
G63204 NA non-coding upstream 74185 12180187 ~ 12189479 (+)
G63207 NA non-coding upstream 124254 12131897 ~ 12139410 (+)
G63195 NA non-coding upstream 208417 12055042 ~ 12055247 (+)
LOC122350249 NA non-coding upstream 209312 12052582 ~ 12054352 (+)
G63188 NA non-coding upstream 246312 12016726 ~ 12017352 (+)
LOC122350247 NA non-coding downstream 271971 12547744 ~ 12570426 (+)
G63534 NA non-coding downstream 364303 12640076 ~ 12640617 (+)
G63538 NA non-coding downstream 455282 12731055 ~ 12732041 (+)
G63552 LOC107556489,LOC107717529,LOC107591772,LOC107711952 non-coding downstream 539192 12814965 ~ 12892529 (+)
G63665 kazna,LOC107711950,LOC107591771,LOC107669642,LOC107680131,LOC107717500,LOC107556484 non-coding downstream 676815 12952588 ~ 12953461 (+)
lamtor5 lamtor5,xip,LOC107668015,LOC106566397 other upstream 203467 12057657 ~ 12060197 (+)
LOC122350223 NA other upstream 212696 12047509 ~ 12050968 (+)
si:ch211-163l21.10 LOC107731153,LOC107549947,LOC107668018,LOC107745734 other upstream 406243 11853594 ~ 11857421 (+)
fance LOC107731142,LOC107668098,LOC107549969,LOC107678824,LOC107745739,LOC107591838,LOC107577385 other upstream 443005 11817057 ~ 11820659 (+)
ppdpfa ppdpfa,LOC107678627,LOC107549986,LOC107745755,LOC107668053,LOC107731217,LOC108412507,LOC103034602 other upstream 699256 11562281 ~ 11564408 (+)
G63453 NA other downstream 214487 12490260 ~ 12491924 (+)
G63533 NA other downstream 362457 12638230 ~ 12638565 (+)
LOC122350405 LOC107556500,LOC107717521,LOC107669623,LOC107679608,LOC107591846 other downstream 468405 12744178 ~ 12747558 (+)
zgc:136971 zgc:136971,LOC107717528,LOC107669673,LOC107556470 other downstream 546261 12822034 ~ 12833000 (+)
G63676 NA other downstream 731649 13007422 ~ 13008830 (+)

Expression


Co-expression Network