gstm.1 (LOC107550498,LOC107591812,LOC107679185,LOC107679206)


Basic Information

Item Value
gene id gstm.1
gene name LOC107550498,LOC107591812,LOC107679185,LOC107679206
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 12306203 ~ 12308908 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246588.1
GTGCGCGCGCACGCCCCCCCTCCATTCCGCCTCTCCGCTCCTCATTTTGAAGCACGACGGTACGGAGCGCGCTTTTGTTGCAAAATGGCAATGAAATTGGCATATTGGGATATTCGTGGGCTTGCTCAACCGATCCGTCTTCTGTTGGAATACACTGGTACTAAGTATGAGGAGAAGTTCTATTCCTGTGGTGAGGCTCCCAATTACGACAAAAGCTGTTGGTTTAATGAGAAAGAGAAACTTGAGATGGACTTTCCTAATTTGCCCTACCTAGAGGATGGAGACACGAAGGTGGTCCAAAGCAATGCCATAATGAGATACATCGCCCGCAAACACAAGCTCTGTGGGGAGACTGAAGAAGAGCAGGTGAGAGTTGACATCTTGGAAAACCAGGCGATGGACTTCCGCAATGGTTTTGTCCAGCTTTGCTATGGAGACTTTgacaaaaacaaagcatgctACGCTGACAAACTGCCAGGGACGCTAAAGCAGTTCTCTAACTTCCTTGGTGACAGGAAGTGGTTTGCTGGTGACAATATCACATTTGTGGACTTCATCATGTTTGAGTTGCTGGATCAGCATCGTATGTTTGACCCAGCGTGCCTGGATGACTACAGAAACCTGAGATGTTTCCTTGAGCGCTTTGAGAGTCTTGAGAAGATTGTAGAATACATGAAGTCAAAGAAGTTCATTAAAACACCCGTGAACAACAAGATGGCCAAATGGGGAAACAAGAAGGAGTGAAGCCAACAAGATTGTTTCTTGATAAAGCATTGCTAGGTGCAACATCATCTGCTTTGGTTATAAGGTCAGTGCAGATGAACTGCACACCGCTAATCtttttgtgaacaatattttaaGCCTTTCAATAACTAACAATGCGATGCAGTTGTCATTAGTATTCATTATAAAAGCGTTGTGAAACAATCAGAATTCTCAGTTGTTGTCTCTAGAAATAATGCAAGCACTTAGATTAGgcttaaaatgaaagtgtttagATGAGTGTCGCACTTTGATTTTTGATGCCTTCAGAAGAATAGAAGcatttcattgttattttgtgGATCTCACTGTTTGGATTGTGATTCTACATTTGAAGACAAAGCATTAAATGCAGTTCCTTATTTTGACCCAATAAAAGCACAGCACTGTTTTGTTCAA

Function

NR:

description
PREDICTED: glutathione S-transferase Mu 3-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0004364 glutathione transferase activity molecular_function

KEGG:

id description
K00799 GST, gst; glutathione S-transferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246588.1 True 1161 mRNA 0.42 8 12306203 12308908

Neighbor

gene id symbol gene type direction distance location
ampd2b ampd2,LOC107668035,LOC107550495,LOC107679126 coding upstream 491 12286677 ~ 12305712 (+)
gnai3 gnai3,LOC107731160,LOC107679171,LOC107668041,LOC107550494,LOC107591822,LOC107711987,LOC108442115,LOC108265813 coding upstream 30430 12263664 ~ 12275773 (+)
gpr61 gpr61,LOC107711990,LOC107680283,LOC107591819,LOC107550469,LOC107731157,LOC107668011 coding upstream 45989 12252231 ~ 12260214 (+)
atxn7l2b LOC107668112,LOC107550490,LOC107731254,LOC107711991,LOC107591815 coding upstream 77704 12220892 ~ 12228499 (+)
sypl2b LOC107550468,LOC107668009,LOC107711993 coding upstream 87734 12215778 ~ 12218469 (+)
LOC122350230 LOC107591812,LOC107550498,LOC107679185,LOC107679206,LOC107550499 coding downstream 4739 12313647 ~ 12315719 (+)
LOC122350181 LOC107731189,LOC107668014,LOC107550472,LOC107711983,LOC107679230,LOC107591808 coding downstream 19636 12328544 ~ 12334608 (+)
dnase1l1l dnase1l3l,LOC107731190,LOC107668021,LOC107550473,LOC107591809,LOC107711985 coding downstream 25939 12334847 ~ 12337129 (+)
si:dkey-183p4.10 NA coding downstream 28865 12337773 ~ 12342463 (+)
tmem81 tmem81 coding downstream 119022 12427930 ~ 12429842 (+)
G63204 NA non-coding upstream 116724 12180187 ~ 12189479 (+)
G63207 NA non-coding upstream 166793 12131897 ~ 12139410 (+)
G63195 NA non-coding upstream 250956 12055042 ~ 12055247 (+)
LOC122350249 NA non-coding upstream 251851 12052582 ~ 12054352 (+)
G63188 NA non-coding upstream 288851 12016726 ~ 12017352 (+)
LOC122350247 NA non-coding downstream 238836 12547744 ~ 12570426 (+)
G63534 NA non-coding downstream 331168 12640076 ~ 12640617 (+)
G63538 NA non-coding downstream 422147 12731055 ~ 12732041 (+)
G63552 LOC107556489,LOC107717529,LOC107591772,LOC107711952 non-coding downstream 506057 12814965 ~ 12892529 (+)
G63665 kazna,LOC107711950,LOC107591771,LOC107669642,LOC107680131,LOC107717500,LOC107556484 non-coding downstream 643680 12952588 ~ 12953461 (+)
lamtor5 lamtor5,xip,LOC107668015,LOC106566397 other upstream 246006 12057657 ~ 12060197 (+)
LOC122350223 NA other upstream 255235 12047509 ~ 12050968 (+)
si:ch211-163l21.10 LOC107731153,LOC107549947,LOC107668018,LOC107745734 other upstream 448782 11853594 ~ 11857421 (+)
fance LOC107731142,LOC107668098,LOC107549969,LOC107678824,LOC107745739,LOC107591838,LOC107577385 other upstream 485544 11817057 ~ 11820659 (+)
ppdpfa ppdpfa,LOC107678627,LOC107549986,LOC107745755,LOC107668053,LOC107731217,LOC108412507,LOC103034602 other upstream 741795 11562281 ~ 11564408 (+)
G63453 NA other downstream 181352 12490260 ~ 12491924 (+)
G63533 NA other downstream 329322 12638230 ~ 12638565 (+)
LOC122350405 LOC107556500,LOC107717521,LOC107669623,LOC107679608,LOC107591846 other downstream 435270 12744178 ~ 12747558 (+)
zgc:136971 zgc:136971,LOC107717528,LOC107669673,LOC107556470 other downstream 513126 12822034 ~ 12833000 (+)
G63676 NA other downstream 698514 13007422 ~ 13008830 (+)

Expression


Co-expression Network