CI01000005_02492230_02501125


Basic Information

Item Value
gene id CI01000005_02492230_02501125
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 2491664 ~ 2501504 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_02492230_02501125.mRNA
ATATAAAAAATGGGTGCGACCAAACTGTGAGTTGGTGTGGCCAACTGAGAAAGTTAAGTCGCACTAGTGCGACCAGTGGGAAGAATGAGTCTAGAGCCCTGCCAATACTAGAATTTTCAGTGTGAGTGAGTGTGAAAGAAAACACAAAATAAAGTTCAAGATGATGACTTTATAATTTGTTATGGATAGTGCAATAATATCATTATTGTGAATTCATTTGGCCACAATAATCGTGTAGTGGAAATCAAATATTGTGACAGCCCTAGTTTGTGGCACAATATGACATGGATGAGTCTTTCAAATCATGCTGCTTAATAAGGAGCAGTGTGCTATTACTTTGCAAGGCAATCTGATTTTCACCTAGTAAATGATAAAATGGGTGAGGAAAACAAAAACATTGTTTAGACTTACACAAGAAAAAAGAGAGACCAGAGGAATATCATTGACTTGATGGTGGACTAATTGGACTTGGGCCAGTAAATAACCACTCAGATTTCCATGAGCAATCTAACATTACAAATGTAGTTGCTAATATCGTTAAATCCCAAAGACTTTGATTCCTAAAGATGGCAGCTTTTGTTTTCGTAATCATTATATGTGACTGGACACTTTCACTGGTATTTCGAACATTATTTCAGGCACTCAACACAAGAGGAATTAAACAAAGAAAATACCTGCTGGCCCAAAACTGGCTTTCCATCTGCCTACCTCTTGGACTCAGTGCTTGTACAGCCTGTGAGTTCCTGCTCCGAGAATCTCCCAGCTACGCTTCATTGGGGATAACCAAGCAAAAGGACAGATATGGATTGAGCTGGGCAAAGAGGACAGCCAGACATCCCTCGGGTCAGACCCAGCTGCCAAACATGAAAGATTCACTGTCCATAAGCGAACAAGATAAACTGCTAATTGAACATTGCATCAGCTCAAACGGACGCTATGGGTTTTCTTCTCCTCACCAATCAATTTTATATTATTTGGCCCAACAGGCCCGTCTTGCACAGCAGGCCAAAGTGCACTATAGTGAAAGCCTAACTGGAAGACAAAGGCAGTCACATCGCGCTCCTCCTTTTGTGGAGAAAGAGAGGCTCAGGGGAAGTTCCCTGAGGCGTCCCTCAATCTTTCAGACAGGAAATCATCACAAAAAGCATGTCCCCATGGCGATTCACATGAAGCTTGAAGACTATTGGCCAGTTATATATTCAGCCCCAGTGAACCACGTCAGGCCAAAATACGAGAAGAAAAGACAAGGGGACACCACCATTTCACATAATAATCAAACTGTGCCCTACATAACAGCGTCTATTTCAAAAGTCCAGCATTACGGCTTTGATCCGGCAGCCAGTCTGAGATCTGAGCGCATGCCTGCAGGTGCACCGCAAAGATCTATGAAATCAGAGGAGAAGCAGGAGGGGTGCGGCTCACTTCCACAGTCCACAGATCCAAAAAAGGGAAAACTCAAGAGAGCACTCTCATATTTCCCAGCTATCTTCCTGCAGTGCAATCAGAATCCTTTAAGAGCAGCGCATCATATATTTACAGAGCTGGACGGAGATGCCTTACCTGGAGGCCTCCGGTGGAGCAGGCAGGAGTTAAATATTAATTGTGAGTGATTCATCGCCTGAAGCCTGGACAGGCCTGCAGCTCAGCTCCAGCTGTTGGTTGGCCCTGGTCTCCTTCCAGGCCTGGCAGCCATAGCTTGGCTCGGGCAGCAGAAGCCACACATCAGGGTGTCAGTTGGAGCCAGCAGACTGTGTCACCCATGCTGGGGAGGCAATGAGGCAAGGAAGCCTCCGCCACATGTGCAGGGGGATCCGAGGGCTAATGCTGGGACCGGATCAACTTTAGATCGAGCGGGTGAATCTCACCAAAACTGTCACGAACTTGTCTAAGTCACATTTCAAAGCAGAAAAGAAAAAAAAAAGTATGTATCCACTGCAATTACCATTACTGCAATACAGGAATTTGTACTATATTACAGTAATGTAAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_02492230_02501125.mRNA True 1989 mRNA 0.45 5 2491664 2501504

Neighbor

gene id symbol gene type direction distance location
CI01000005_02380484_02385701 NA coding upstream 105198 2379752 ~ 2386466 (+)
CI01000005_01966840_01968600 C1D coding upstream 522710 1966559 ~ 1968954 (+)
CI01000005_01909422_01922476 PSAP coding upstream 569073 1908742 ~ 1922591 (+)
CI01000005_01902623_01902991 MRPS6 coding upstream 588598 1902623 ~ 1903066 (+)
CI01000005_01795371_01878902 MICU1 coding upstream 612708 1795371 ~ 1878956 (+)
CI01000005_02607747_02613729 NA coding downstream 105457 2606961 ~ 2614389 (+)
CI01000005_02700297_02715015 PHF10 coding downstream 198793 2700297 ~ 2715015 (+)
CI01000005_02772221_02779729 FAM120B coding downstream 270608 2772112 ~ 2779974 (+)
CI01000005_02846022_02853830 PPM1G coding downstream 344181 2845685 ~ 2853830 (+)
CI01000005_02867301_02880721 APMAP coding downstream 365797 2867301 ~ 2881622 (+)
G36936 NA non-coding upstream 68368 2423089 ~ 2423296 (+)
G36874 NA non-coding upstream 179223 2308581 ~ 2312441 (+)
G36848 NA non-coding upstream 273916 2217435 ~ 2217748 (+)
G36833 NA non-coding upstream 292241 2199177 ~ 2199423 (+)
G36206 NA non-coding upstream 599840 1888494 ~ 1891824 (+)
G37061 NA non-coding downstream 70481 2571985 ~ 2572439 (+)
G37076 NA non-coding downstream 95864 2597368 ~ 2597587 (+)
G37077 NA non-coding downstream 99754 2601258 ~ 2601475 (+)
G37110 NA non-coding downstream 165221 2666725 ~ 2667088 (+)
G37121 NA non-coding downstream 238550 2740054 ~ 2740282 (+)
G36291 NA other upstream 830632 1659733 ~ 1661032 (+)
G36223 NA other upstream 953860 1503143 ~ 1537804 (+)
G35533 NA other upstream 1967883 491908 ~ 523781 (+)
G37392 NA other downstream 1221240 3722744 ~ 3723503 (+)
CI01000005_04735429_04736817 COX20 other downstream 2233842 4735346 ~ 4737082 (+)
G39930 NA other downstream 4496040 6997544 ~ 6998340 (+)
CI01000005_07600541_07600974 NA other downstream 5096485 7600541 ~ 7602964 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_006406 NA non-coding NC_007124.7 CM002897.2 5730915 ~ 5732497 (-)