G39930


Basic Information

Item Value
gene id G39930
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 6997544 ~ 6998340 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU45244
CACAGAGCTTAAGTCAGACTCACACACACACAAGGGCTCAGTTCGAGAGAAGATGGGTCTCTTGATGCTGATCGCAGCTGGTGCTGGAGCAGCCGGTGCAGTTGCTGCTGCTCCAGTTGTTCTGGCGACTGTGGGTTTCACTAGCGCCGGGATCGCCGCAGGCTCTTACGCGGCATCACTAATGTCAGCTGCCGCTGTGGCGAATGGAGGGGGGGTCGCAGCCGGATCAATGGTTGCAGTTCTTCAAGCCGCTGGTGCGGCTGGAATCCCAATTGTGGGTCAGGCAGCTGTGGGCGCTGCAGGGGCCACTGTGGGCACAGTTTTGGGGATCCTTATTTGAGCTGACCATGAGCTGAGCTGAGCCAGACATATTCTGTTTCTGTTGAATATACAAATAAAATTTTCTTCATTATCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45244 True 417 TUCP 0.36 4 6997544 6998340

Neighbor

gene id symbol gene type direction distance location
CI01000005_06988616_06989546 HEATR5B coding upstream 7998 6988616 ~ 6989546 (+)
CI01000005_06965750_06987383 HEATR5B coding upstream 9925 6965750 ~ 6987619 (+)
CI01000005_06963000_06963933 NA coding upstream 32880 6962450 ~ 6964664 (+)
CI01000005_06954470_06955113 NA coding upstream 42296 6954470 ~ 6955248 (+)
CI01000005_06927239_06932095 NA coding upstream 65349 6927239 ~ 6932195 (+)
CI01000005_07130117_07133993 NA coding downstream 130495 7128835 ~ 7134039 (+)
CI01000005_07159231_07159796 NA coding downstream 160338 7158678 ~ 7159805 (+)
CI01000005_07163500_07164501 NA coding downstream 165092 7163432 ~ 7164698 (+)
CI01000005_07176040_07176850 NA coding downstream 177313 7175653 ~ 7176970 (+)
CI01000005_07179247_07180248 NA coding downstream 180854 7179194 ~ 7180566 (+)
G39906 NA non-coding upstream 58790 6938523 ~ 6938754 (+)
G39865 NA non-coding upstream 236461 6760778 ~ 6761083 (+)
G39864 NA non-coding upstream 243502 6753809 ~ 6754042 (+)
G39838 NA non-coding upstream 330599 6666742 ~ 6666945 (+)
G39835 NA non-coding upstream 337590 6656535 ~ 6659954 (+)
G39943 NA non-coding downstream 26677 7025017 ~ 7027390 (+)
G40005 NA non-coding downstream 146535 7144875 ~ 7145896 (+)
G40035 NA non-coding downstream 235457 7233797 ~ 7234020 (+)
G40039 NA non-coding downstream 240708 7239048 ~ 7239267 (+)
G40048 NA non-coding downstream 250073 7248413 ~ 7248745 (+)
CI01000005_04735429_04736817 COX20 other upstream 2260687 4735346 ~ 4737082 (+)
G37392 NA other upstream 3274041 3722744 ~ 3723503 (+)
G36291 NA other upstream 5336512 1659733 ~ 1661032 (+)
G36223 NA other upstream 5459740 1503143 ~ 1537804 (+)
G35533 NA other upstream 6473763 491908 ~ 523781 (+)
CI01000005_07600541_07600974 NA other downstream 599649 7600541 ~ 7602964 (+)

Expression


Co-expression Network