CI01000005_07159231_07159796


Basic Information

Item Value
gene id CI01000005_07159231_07159796
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 7158678 ~ 7159805 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_07159231_07159796.mRNA
ATATAAATAAGCTGTAGAATCAATAGATAACTCTTTAAAAATGATTACATGTGACCTTACATGTTTGAGTCTCTATTGCTATATTATCAAGCAACTACATAAACTAACTTCACAAGTTTCACTTGCACTGATAGAGCAAGATCATTTCTTTTATTTTTCCTCTTTCATGGACAAGTATTTTCTTTAGTGTAAATGCGTTTAAATTCTTCATTTTCTTCAATCTCTTAACCTTCAGCAAAAGAGTTTTGAATCACGCTGGCTGTCTCGTGAGAAGTGAATCAGAGTTTCTCTCTGTTGCAAGGCATGCGATTGGCTGTTCACTGATGTCACGCATTCATGTGCACCCGCTCCACAAACTTAGGATCAAAGCCTGAGTTGACAGAGCAAGTTGATGATCAGCATCATGGTACCAACATAGCCGGATTGGAGTGGTTTGGTTTTGTCAACTCAAAACTAATCCTATAACCCTGAGTTTGTTCAACTACCATCATGGTACAGGCCCCTGGTGACTCAAACCAATCAACCGCCATTCCTGTTGATGATGAGGGGAGCAATGACGTTCAGGAATCGGAGCGATGATAGTGAAATAGTCGCGTCGATCTGGTTAAACAGGTTTCCTCGCGCACAGACAACCGATGACTCAACGACGAAGAACAGGGAGAAACCCCTTGCTGCCAGCGGAACTCCGAGTGTTGCCTGCTCCTCCCCTTCACCTCTGCCCTGGACATCCGATTGGCCACACACAAGATAAGATATAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_07159231_07159796.mRNA True 760 mRNA 0.43 2 7158678 7159805

Neighbor

gene id symbol gene type direction distance location
CI01000005_07130117_07133993 NA coding upstream 24639 7128835 ~ 7134039 (+)
CI01000005_06988616_06989546 HEATR5B coding upstream 169132 6988616 ~ 6989546 (+)
CI01000005_06965750_06987383 HEATR5B coding upstream 171059 6965750 ~ 6987619 (+)
CI01000005_06963000_06963933 NA coding upstream 194014 6962450 ~ 6964664 (+)
CI01000005_06954470_06955113 NA coding upstream 203430 6954470 ~ 6955248 (+)
CI01000005_07163500_07164501 NA coding downstream 3627 7163432 ~ 7164698 (+)
CI01000005_07176040_07176850 NA coding downstream 15848 7175653 ~ 7176970 (+)
CI01000005_07179247_07180248 NA coding downstream 19389 7179194 ~ 7180566 (+)
CI01000005_07259213_07282404 CH1073-291C23.1, VIT coding downstream 99408 7259213 ~ 7283295 (+)
CI01000005_07297797_07302584 NA coding downstream 137992 7297797 ~ 7302676 (+)
G40005 NA non-coding upstream 12782 7144875 ~ 7145896 (+)
G39943 NA non-coding upstream 131288 7025017 ~ 7027390 (+)
G39906 NA non-coding upstream 219924 6938523 ~ 6938754 (+)
G39865 NA non-coding upstream 397595 6760778 ~ 6761083 (+)
G39864 NA non-coding upstream 404636 6753809 ~ 6754042 (+)
G40035 NA non-coding downstream 73992 7233797 ~ 7234020 (+)
G40039 NA non-coding downstream 79243 7239048 ~ 7239267 (+)
G40048 NA non-coding downstream 88608 7248413 ~ 7248745 (+)
G39962 NA non-coding downstream 124038 7283843 ~ 7284924 (+)
G40078 NA non-coding downstream 163654 7323459 ~ 7323666 (+)
G39930 NA other upstream 160338 6997544 ~ 6998340 (+)
CI01000005_04735429_04736817 COX20 other upstream 2421821 4735346 ~ 4737082 (+)
G37392 NA other upstream 3435175 3722744 ~ 3723503 (+)
G36291 NA other upstream 5497646 1659733 ~ 1661032 (+)
G36223 NA other upstream 5620874 1503143 ~ 1537804 (+)
CI01000005_07600541_07600974 NA other downstream 438184 7600541 ~ 7602964 (+)

Expression


Co-expression Network