G39943


Basic Information

Item Value
gene id G39943
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 7025017 ~ 7027390 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU45260
AAGTGATGTGACGAGTCTTACAGCAGATGGAGGGCTGGTGTGTGAATGAAACTCTCTTTAGGGATTTCAGTAAAGCCAGACTTGACGAACGATCTGGAAGGAAAAAAAACATCAATAACTGGAAACAGTTTTTTGAATGGAAGTTCCCCAAACCGGAAGTGCCACCCATAATTCAAAACGCAGCAGGCTCGTCAGGAATAAGGTGAATAAAAAGTGTTCCATCTATCCTACCCATTTTCAATTAGCAAGGTTTCCATCCAACGATTTTTATTTATTTTTTACATTTTTTTTGAAAAAAAAAAAAAAAAGGTTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45260 True 315 lncRNA 0.37 2 7025017 7027390

Neighbor

gene id symbol gene type direction distance location
CI01000005_06988616_06989546 HEATR5B coding upstream 35471 6988616 ~ 6989546 (+)
CI01000005_06965750_06987383 HEATR5B coding upstream 37398 6965750 ~ 6987619 (+)
CI01000005_06963000_06963933 NA coding upstream 60353 6962450 ~ 6964664 (+)
CI01000005_06954470_06955113 NA coding upstream 69769 6954470 ~ 6955248 (+)
CI01000005_06927239_06932095 NA coding upstream 92822 6927239 ~ 6932195 (+)
CI01000005_07130117_07133993 NA coding downstream 101445 7128835 ~ 7134039 (+)
CI01000005_07159231_07159796 NA coding downstream 131288 7158678 ~ 7159805 (+)
CI01000005_07163500_07164501 NA coding downstream 136042 7163432 ~ 7164698 (+)
CI01000005_07176040_07176850 NA coding downstream 148263 7175653 ~ 7176970 (+)
CI01000005_07179247_07180248 NA coding downstream 151804 7179194 ~ 7180566 (+)
G39906 NA non-coding upstream 86263 6938523 ~ 6938754 (+)
G39865 NA non-coding upstream 263934 6760778 ~ 6761083 (+)
G39864 NA non-coding upstream 270975 6753809 ~ 6754042 (+)
G39838 NA non-coding upstream 358072 6666742 ~ 6666945 (+)
G39835 NA non-coding upstream 365063 6656535 ~ 6659954 (+)
G40005 NA non-coding downstream 117485 7144875 ~ 7145896 (+)
G40035 NA non-coding downstream 206407 7233797 ~ 7234020 (+)
G40039 NA non-coding downstream 211658 7239048 ~ 7239267 (+)
G40048 NA non-coding downstream 221023 7248413 ~ 7248745 (+)
G39962 NA non-coding downstream 256453 7283843 ~ 7284924 (+)
G39930 NA other upstream 26677 6997544 ~ 6998340 (+)
CI01000005_04735429_04736817 COX20 other upstream 2288160 4735346 ~ 4737082 (+)
G37392 NA other upstream 3301514 3722744 ~ 3723503 (+)
G36291 NA other upstream 5363985 1659733 ~ 1661032 (+)
G36223 NA other upstream 5487213 1503143 ~ 1537804 (+)
CI01000005_07600541_07600974 NA other downstream 570599 7600541 ~ 7602964 (+)

Expression


Co-expression Network