CI01000005_06954470_06955113


Basic Information

Item Value
gene id CI01000005_06954470_06955113
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 6954470 ~ 6955248 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_06954470_06955113.mRNA
GATCAGCTTCATCTAAACTCAGGATTGTTCTTGTGGGTAAAACTGGATCGGGAAAGAGTGCGACAGGAAACACCATCTTAGGTCGAGAGTGTTTTAGGGAGGCTGCTTCAGCAGTGTCAGTTACTAACACCTGTGAGAGTGGAGAAGTACTGATTGATGAAAGGAGCGTCTCAGTCATCGACACTCCAGGCCTGTGTGATACAACACGGTCAGAACAAGAAGTAAAGAATGAGATAGAGAGCTGTGTTGACATGTCTGCTCCTGGTCCTCATGCGTTTCTGCTGCTGATCAAAGTGGGGAGATTTACAGAAGAGGAGAAAAACACAGTGAAATGGATCCAGGAGAACTTTGGAGAAGAAGCTGCACGTTACACCATCATTCTGTTCACTCATGATGATGCACTATACGGGAAACCATTAGATGAGTATATCAATGAAAGTAATGATCTGAAGGCTCTTGTTGGTAAGTGTGGTGGCAGATTTCACTCATTCAACAATAGAAACACGGAGAACCGCTCTCAGGTCACTGAACTGCTGGAGAAGATTGAGGAGATGGTGGAAGAGAATGGAGGACTGCATTATACCAATGAGATGTACCAGAAGGCTCAGAGAAGGATACAAGATAGAGCACAGTTCTGTAAGTGACTGACTTTCTGTGTTTTTGAAACATAACCCTTACAGAAAGAAAATATATTTCCATTTATGATCAATATATTTAATGGTTTAAATATAGTCCTGCATCAGTCACTGTCTGATTCACTTCATTTTCTATTGATTACA

Function

NR:

description
GTPase IMAP family member 7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_06954470_06955113.mRNA True 779 mRNA 0.42 1 6954470 6955248

Neighbor

gene id symbol gene type direction distance location
CI01000005_06927239_06932095 NA coding upstream 22275 6927239 ~ 6932195 (+)
CI01000005_06901329_06921880 TP53BP2 coding upstream 32586 6901329 ~ 6921884 (+)
CI01000005_06809700_06812138 NA coding upstream 142020 6809700 ~ 6812450 (+)
CI01000005_06805919_06809589 NA coding upstream 144881 6805580 ~ 6809589 (+)
CI01000005_06707248_06710543 NA coding upstream 243627 6707248 ~ 6710843 (+)
CI01000005_06963000_06963933 NA coding downstream 7202 6962450 ~ 6964664 (+)
CI01000005_06965750_06987383 HEATR5B coding downstream 10502 6965750 ~ 6987619 (+)
CI01000005_06988616_06989546 HEATR5B coding downstream 33368 6988616 ~ 6989546 (+)
CI01000005_07130117_07133993 NA coding downstream 173587 7128835 ~ 7134039 (+)
CI01000005_07159231_07159796 NA coding downstream 203430 7158678 ~ 7159805 (+)
G39906 NA non-coding upstream 15716 6938523 ~ 6938754 (+)
G39865 NA non-coding upstream 193387 6760778 ~ 6761083 (+)
G39864 NA non-coding upstream 200428 6753809 ~ 6754042 (+)
G39838 NA non-coding upstream 287525 6666742 ~ 6666945 (+)
G39835 NA non-coding upstream 294516 6656535 ~ 6659954 (+)
G39943 NA non-coding downstream 69769 7025017 ~ 7027390 (+)
G40005 NA non-coding downstream 189627 7144875 ~ 7145896 (+)
G40035 NA non-coding downstream 278549 7233797 ~ 7234020 (+)
G40039 NA non-coding downstream 283800 7239048 ~ 7239267 (+)
G40048 NA non-coding downstream 293165 7248413 ~ 7248745 (+)
CI01000005_04735429_04736817 COX20 other upstream 2217613 4735346 ~ 4737082 (+)
G37392 NA other upstream 3230967 3722744 ~ 3723503 (+)
G36291 NA other upstream 5293438 1659733 ~ 1661032 (+)
G36223 NA other upstream 5416666 1503143 ~ 1537804 (+)
G35533 NA other upstream 6430689 491908 ~ 523781 (+)
G39930 NA other downstream 42296 6997544 ~ 6998340 (+)
CI01000005_07600541_07600974 NA other downstream 642741 7600541 ~ 7602964 (+)

Expression


Co-expression Network