CI01000005_06927239_06932095


Basic Information

Item Value
gene id CI01000005_06927239_06932095
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 6927239 ~ 6932195 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_06927239_06932095.mRNA
ATGGAATCTGGGAAACGTATTCCATTAGCAAGCAAAGAGAGCAGTGAGGAAGATTTTCAAATTTCCTTTGTTTGCCATCGACCTGAAGGTCTGGAAACACTAGAGGAACAGACCAAATTCAGCAAGAAAGAGCTGCAGTTCCTCTACAGGGCCTTCAAAAATGAATGTCCCAGTGGAGTGGTGGATGAGGACGTGTTTAAACTCATTTACTCCCAGTTCTTCCCACAAGGAGATTCAAGCAATTATGCACATTTCCTATTCGAGGCATTTGACACTAACAAGAATGGCTGTTTGAGTTTTCAGGAGTTTGTTGCTGGACTGTCACTCATCCTTAGGGGCTCAATGTATGACCGGCTGAACTGGGCATTTAATTTCTATGACCATGATAAAGATGGATTCATCACAAAAGAGGAGATGTTGAACATCATGAAGTCGATTTATGATATGATGGGGAAGTACGTGTCTCCACCCATTCAGGACGATATTCCCAGAGAACATGTGGAACGCTTCTTTCAGAAAATGGACAGAAACCGTGATGGAGTGGTCACCATTGAGGAGTTCATTGAGTCATGTCAGAAGGTGAATCTCTATCACTCATAACTGTTATCTGAATGCAAAACAAACAAATTCAGAGATGAAATACTTCAAGGGAGAATTGCAGAAAGCAGGTTTAACTCACCATGACATTAATCCTGAGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_06927239_06932095.mRNA True 700 mRNA 0.42 7 6927239 6932195

Neighbor

gene id symbol gene type direction distance location
CI01000005_06901329_06921880 TP53BP2 coding upstream 5355 6901329 ~ 6921884 (+)
CI01000005_06809700_06812138 NA coding upstream 114789 6809700 ~ 6812450 (+)
CI01000005_06805919_06809589 NA coding upstream 117650 6805580 ~ 6809589 (+)
CI01000005_06707248_06710543 NA coding upstream 216396 6707248 ~ 6710843 (+)
CI01000005_06706460_06706909 NA coding upstream 220330 6706460 ~ 6706909 (+)
CI01000005_06954470_06955113 NA coding downstream 22275 6954470 ~ 6955248 (+)
CI01000005_06963000_06963933 NA coding downstream 30255 6962450 ~ 6964664 (+)
CI01000005_06965750_06987383 HEATR5B coding downstream 33555 6965750 ~ 6987619 (+)
CI01000005_06988616_06989546 HEATR5B coding downstream 56421 6988616 ~ 6989546 (+)
CI01000005_07130117_07133993 NA coding downstream 196640 7128835 ~ 7134039 (+)
G39865 NA non-coding upstream 166156 6760778 ~ 6761083 (+)
G39864 NA non-coding upstream 173197 6753809 ~ 6754042 (+)
G39838 NA non-coding upstream 260294 6666742 ~ 6666945 (+)
G39835 NA non-coding upstream 267285 6656535 ~ 6659954 (+)
G39792 NA non-coding upstream 298998 6627891 ~ 6628241 (+)
G39906 NA non-coding downstream 6328 6938523 ~ 6938754 (+)
G39943 NA non-coding downstream 92822 7025017 ~ 7027390 (+)
G40005 NA non-coding downstream 212680 7144875 ~ 7145896 (+)
G40035 NA non-coding downstream 301602 7233797 ~ 7234020 (+)
G40039 NA non-coding downstream 306853 7239048 ~ 7239267 (+)
CI01000005_04735429_04736817 COX20 other upstream 2190382 4735346 ~ 4737082 (+)
G37392 NA other upstream 3203736 3722744 ~ 3723503 (+)
G36291 NA other upstream 5266207 1659733 ~ 1661032 (+)
G36223 NA other upstream 5389435 1503143 ~ 1537804 (+)
G35533 NA other upstream 6403458 491908 ~ 523781 (+)
G39930 NA other downstream 65349 6997544 ~ 6998340 (+)
CI01000005_07600541_07600974 NA other downstream 665794 7600541 ~ 7602964 (+)

Expression


Co-expression Network