Gene
RNA
| Item | Value |
|---|---|
| gene id | G39838 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000005 |
| NCBI id | null |
| chromosome length | 7630583 |
| location | 6666742 ~ 6666945 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU45146 | True | 204 | lncRNA | 0.46 | 1 | 6666742 | 6666945 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000005_06505675_06506160 | NA | coding | upstream | 160361 | 6505675 ~ 6506381 (+) |
| CI01000005_06491360_06505195 | NA | coding | upstream | 161303 | 6490248 ~ 6505439 (+) |
| CI01000005_06478442_06481075 | GSTA.2, GSTA.1 | coding | upstream | 185353 | 6478191 ~ 6481389 (+) |
| CI01000005_06439978_06442729 | GSTA.1 | coding | upstream | 223769 | 6439743 ~ 6442973 (+) |
| CI01000005_06419247_06426182 | GSTA.2, GSTA.1 | coding | upstream | 240214 | 6419168 ~ 6426528 (+) |
| CI01000005_06668264_06682593 | FBXO28 | coding | downstream | 1101 | 6668046 ~ 6682691 (+) |
| CI01000005_06693330_06699068 | DEGS1 | coding | downstream | 25330 | 6692275 ~ 6699255 (+) |
| CI01000005_06706460_06706909 | NA | coding | downstream | 39515 | 6706460 ~ 6706909 (+) |
| CI01000005_06707248_06710543 | NA | coding | downstream | 40303 | 6707248 ~ 6710843 (+) |
| CI01000005_06805919_06809589 | NA | coding | downstream | 138635 | 6805580 ~ 6809589 (+) |
| G39835 | NA | non-coding | upstream | 6788 | 6656535 ~ 6659954 (+) |
| G39792 | NA | non-coding | upstream | 38501 | 6627891 ~ 6628241 (+) |
| G39737 | NA | non-coding | upstream | 78460 | 6579221 ~ 6588282 (+) |
| G39764 | NA | non-coding | upstream | 111254 | 6552471 ~ 6555488 (+) |
| G39723 | NA | non-coding | upstream | 199602 | 6462747 ~ 6467140 (+) |
| G39864 | NA | non-coding | downstream | 86864 | 6753809 ~ 6754042 (+) |
| G39865 | NA | non-coding | downstream | 93833 | 6760778 ~ 6761083 (+) |
| G39906 | NA | non-coding | downstream | 271578 | 6938523 ~ 6938754 (+) |
| G39943 | NA | non-coding | downstream | 358072 | 7025017 ~ 7027390 (+) |
| G40005 | NA | non-coding | downstream | 477930 | 7144875 ~ 7145896 (+) |
| CI01000005_04735429_04736817 | COX20 | other | upstream | 1929885 | 4735346 ~ 4737082 (+) |
| G37392 | NA | other | upstream | 2943239 | 3722744 ~ 3723503 (+) |
| G36291 | NA | other | upstream | 5005710 | 1659733 ~ 1661032 (+) |
| G36223 | NA | other | upstream | 5128938 | 1503143 ~ 1537804 (+) |
| G35533 | NA | other | upstream | 6142961 | 491908 ~ 523781 (+) |
| G39930 | NA | other | downstream | 330599 | 6997544 ~ 6998340 (+) |
| CI01000005_07600541_07600974 | NA | other | downstream | 931044 | 7600541 ~ 7602964 (+) |
