G39764


Basic Information

Item Value
gene id G39764
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 6552471 ~ 6555488 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU45051
CCCTTAACCAGCTCTACAGCTATGAAGTCATTCCCATCTCCACTGTTGAACAGGATGAGTCCGTCGGATGAGGTGGTCTTGAACTGGAAGAACAGGTGCATGGAGTAGTACGCCTGCAGTGTGCTCAGAGTCATATAGCTTGAGCAGGACTTGAAGGTCACCGGATCCGCAATGATGTTCTTGAAACCGATCACGGCATTGACTTCGCAGTAGTCGATGTCTCCGTTCTTGCAGAGGTCGATGTACGGCTTGCCGTTAAATGTTAGACTCTGGAGATGCCCAATGAAGTTGGAGGGCATGATGGGCAGGTAGCGTTTCTCTGTAATAATTCCTGTCTCTATGTTATGAAACTCCAGCTGTGTGTGGTCACCTGGTATCTCTCCTTCCACAGTGGGCAAATCATCCACAGACAGCTTCAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45051 True 421 lncRNA 0.49 2 6552471 6555488

Neighbor

gene id symbol gene type direction distance location
CI01000005_06505675_06506160 NA coding upstream 46090 6505675 ~ 6506381 (+)
CI01000005_06491360_06505195 NA coding upstream 47032 6490248 ~ 6505439 (+)
CI01000005_06478442_06481075 GSTA.2, GSTA.1 coding upstream 71082 6478191 ~ 6481389 (+)
CI01000005_06439978_06442729 GSTA.1 coding upstream 109498 6439743 ~ 6442973 (+)
CI01000005_06419247_06426182 GSTA.2, GSTA.1 coding upstream 125943 6419168 ~ 6426528 (+)
CI01000005_06668264_06682593 FBXO28 coding downstream 112558 6668046 ~ 6682691 (+)
CI01000005_06693330_06699068 DEGS1 coding downstream 136787 6692275 ~ 6699255 (+)
CI01000005_06706460_06706909 NA coding downstream 150972 6706460 ~ 6706909 (+)
CI01000005_06707248_06710543 NA coding downstream 151760 6707248 ~ 6710843 (+)
CI01000005_06805919_06809589 NA coding downstream 250092 6805580 ~ 6809589 (+)
G39699 NA non-coding upstream 75396 6397875 ~ 6477075 (+)
G39723 NA non-coding upstream 85331 6462747 ~ 6467140 (+)
G39704 NA non-coding upstream 102632 6447175 ~ 6449839 (+)
G39712 NA non-coding upstream 140312 6408596 ~ 6412159 (+)
G39656 NA non-coding upstream 299240 6250929 ~ 6253231 (+)
G39737 NA non-coding downstream 23733 6579221 ~ 6588282 (+)
G39792 NA non-coding downstream 72403 6627891 ~ 6628241 (+)
G39835 NA non-coding downstream 101047 6656535 ~ 6659954 (+)
G39838 NA non-coding downstream 111254 6666742 ~ 6666945 (+)
G39864 NA non-coding downstream 198321 6753809 ~ 6754042 (+)
CI01000005_04735429_04736817 COX20 other upstream 1815614 4735346 ~ 4737082 (+)
G37392 NA other upstream 2828968 3722744 ~ 3723503 (+)
G36291 NA other upstream 4891439 1659733 ~ 1661032 (+)
G36223 NA other upstream 5014667 1503143 ~ 1537804 (+)
G35533 NA other upstream 6028690 491908 ~ 523781 (+)
G39930 NA other downstream 442056 6997544 ~ 6998340 (+)
CI01000005_07600541_07600974 NA other downstream 1042501 7600541 ~ 7602964 (+)

Expression


Co-expression Network