G39737


Basic Information

Item Value
gene id G39737
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 6579221 ~ 6588282 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU45019
TGATGAGATCTTGACCGAATCATTGTTCTGTTTGGCTCCTTCTTAGCTCCTGTAGCTCGATTACCTGACGCAAATTCCGCGTTACTTTCACATCATGCCACTCATTGTCATTAAATTTCCCATTGACCGGCTCCACCAGAGCTTCAAACGCCCCGGAACCCAAATTTATGACAAGAGACACCGCCCCGTTTTTCAGCGCCAGGTTGACATAGTCAGCAGATTTTCCCGTGTGGAGCATCAGTCCGTTTCTCTGAAGCGTTTTGAACGACAGTGTGATTTCATCGCTGCTGCTTTGGATCGGGTTCAGAGAAAGGTCATAGCAGAAGTATTCTGAACCTTTGAATGTCGCCACATATTCTTCTTCTATTCCTTGATCGCCCATCATCAGGTGTGCCAGACCTTGAAGGAAAACAAGAGTACAGTCAGCAAAGAACATGAGCAGGAGTACACTGGGACTGCGTCATCAACAGTGCTTGAGGATGTGACTGAGACTAAAGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45019 True 500 lncRNA 0.42 2 6579221 6588282

Neighbor

gene id symbol gene type direction distance location
CI01000005_06505675_06506160 NA coding upstream 72840 6505675 ~ 6506381 (+)
CI01000005_06491360_06505195 NA coding upstream 73782 6490248 ~ 6505439 (+)
CI01000005_06478442_06481075 GSTA.2, GSTA.1 coding upstream 97832 6478191 ~ 6481389 (+)
CI01000005_06439978_06442729 GSTA.1 coding upstream 136248 6439743 ~ 6442973 (+)
CI01000005_06419247_06426182 GSTA.2, GSTA.1 coding upstream 152693 6419168 ~ 6426528 (+)
CI01000005_06668264_06682593 FBXO28 coding downstream 79764 6668046 ~ 6682691 (+)
CI01000005_06693330_06699068 DEGS1 coding downstream 103993 6692275 ~ 6699255 (+)
CI01000005_06706460_06706909 NA coding downstream 118178 6706460 ~ 6706909 (+)
CI01000005_06707248_06710543 NA coding downstream 118966 6707248 ~ 6710843 (+)
CI01000005_06805919_06809589 NA coding downstream 217298 6805580 ~ 6809589 (+)
G39764 NA non-coding upstream 23733 6552471 ~ 6555488 (+)
G39699 NA non-coding upstream 102146 6397875 ~ 6477075 (+)
G39723 NA non-coding upstream 112081 6462747 ~ 6467140 (+)
G39704 NA non-coding upstream 129382 6447175 ~ 6449839 (+)
G39712 NA non-coding upstream 167062 6408596 ~ 6412159 (+)
G39792 NA non-coding downstream 39609 6627891 ~ 6628241 (+)
G39835 NA non-coding downstream 68253 6656535 ~ 6659954 (+)
G39838 NA non-coding downstream 78460 6666742 ~ 6666945 (+)
G39864 NA non-coding downstream 165527 6753809 ~ 6754042 (+)
G39865 NA non-coding downstream 172496 6760778 ~ 6761083 (+)
CI01000005_04735429_04736817 COX20 other upstream 1842364 4735346 ~ 4737082 (+)
G37392 NA other upstream 2855718 3722744 ~ 3723503 (+)
G36291 NA other upstream 4918189 1659733 ~ 1661032 (+)
G36223 NA other upstream 5041417 1503143 ~ 1537804 (+)
G35533 NA other upstream 6055440 491908 ~ 523781 (+)
G39930 NA other downstream 409262 6997544 ~ 6998340 (+)
CI01000005_07600541_07600974 NA other downstream 1009707 7600541 ~ 7602964 (+)

Expression


Co-expression Network