CI01000005_06491360_06505195


Basic Information

Item Value
gene id CI01000005_06491360_06505195
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 6490248 ~ 6505439 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_06491360_06505195.mRNA
GTTTAAAAAAGGTGAAATTCTCAATAAATAAATTCTCAATAATAATTCTCAGTAAATAAAAGTAAATGGAACACCATTGTTCTGGATATTATAATTAATTTGGGGAATCATGTGAGTCAAGTCAAATTCCTGAAGTGTCAAGGTGGTGTAACCACCTTTCAAGGAGCCATTTTGTTCAAATTGTGCAAGAAGACCATGTGACATGAGTATTAACTTTTTAAAATATTCCCTCCAAGGCCATGTGCTTACATAGGTGTCCATGATAATGCCTGTCAAATTTGATTTTAAATTGAAATGTCAAATGGTGTATCCGGTTACACCATTTGACTCCTATTACAAACCTTTCTGTTATAGGGGCCAATTTAGTCAAATATCCCTAGTTTATGATGCTGATTAAAGATGTAATATAAACTAACCTACTATTTGGAACTATTTTCAAGTGTTTTTTTATTGAGAATTTCACCTTTTTTAAACAAGATCAGTTATTTGGTACAAAGTTTTTATGATTACACCACATTAACATTTTTGCAGTCATCCTCCAAATATTATCTCAAAATGAATTAAAACAGACTTGGTAAGTTGTAAGTTAAACAACTAAACAACTTAAAGACAAAATTAAGTCAATATTGTCCTCTATCGATTGTAAATGAATACAATCAGTAATAATAGAATAATTAATTAGTAAAAAAAAAAAAGACCAGCGAAACATTTTAGATATTAACTAACTTTAATAATAATGCCTGTTTACATGTATACCGATAGACTAAGGTAATAATATCATTATATAGCATTCCGCCTGTTTTACGGTGTTTGCGATATTCTCTCAGGGCTCCGGGCTGCTATTTTTTTCGTGCTGGTGTGAGTACAGAGTTGCGAGTGTGAAACACCAAACGTCAAACACAATCACCTACATTTATCTTGGATTTACTGTAGTAAAACTAACTGTAACTGTGGTATTTTGGCAGAAATGTGGTATATTAATATCAGATGTTGTTATATGAATATAGTCATGCATGTAATCTATTAAATGTTAGAGTCTCTAATTAAGCTATGGCAGTTTTTGCATTTATATTAAATGTGTTGTACTAAATGTGTGTTTATGTTTTAGAGAAATGGATTCATTTGTTAAGGAACGACTAGAAGAGTGGAACCTCAGCCATTTAATTGAAACATTTCAAGAGGAAGGAGTGGATGAAGAAAGTTTTTTGCTACTGGATGATGCCAGCATTGCTGCTCTAATTCCAAGAATTGGTGTCAGGGTTAAATTCAAGAAATATCATTCAGAACTTTTGGAAGATATACGAGAAATACTCCAAAATTCTGGAGGATCAGCGTTAATTACATCTTTAGACACAGACATGCATCTAAGCCTCAAAGAGCGACATAAGATGGTGCGGTTGTTGGTTTCTCATTTAATGGAAAGGTTTGGGGAAAACCCAACAGCTGAGATCAAAAAGGAGATGGCTTTAGCAATAATTGACCAGTTTCCTTGTCTGAAAAGCAATGAGGGACACGGATATGAGGTATGGTATACACCTTGTCGTTCTCGTCACCCTGCAACCGGGTATCTAGAAGAAAGACTCCGCAACGTGAGGAAACGTCTTAGAGCCCCACAGAAACGACACAGCTATTCACACCCATTTCTCCTGCCAGAGTCTGAGTTGTCTTCGACTGACATTCAAACAATGCTTGAGTGGCTAAAGAACAATAGAAGTACTCACAGCCAAGTCCAGGAGTTCATGAGTCATACAGCACCTCCTCAAGGAACCTCTGAAACAAAAACTATTGAAGAAATCAATGGAGAATATCCTAGATTTATCGACTTTTCTGGAATGGATATACGAGAAATACTCCAAAATTCTGGAGGATCCGCGATAATAACATCTTTAGACAGAGACAGGCACCTAAGCCTCAAGGAGCGACGTCAGATGGTGCAGTTGTTGGTTTATCATTTAATGGAAAGGTTTGGAGAAAACCCAACAGCTGAGATCAAAAAGGAGATGGCTTTGGCAATAACTGCCCAGTTTCCTTGTCTGAAAAGCAATGAGGGACATGGATATGAGGTATGGTATACACCTTGTCGTTATCGTCACCCTGCAACCGGGTATCTAGAAGAAAGACTCCGCAACGTGAGGAAACGTCTTAGAGCCCCACTTAGACGGCACAGCCAACCACAGCCATCCCAGAATTCCTCTTCCCGATCCAGTTTTCCACTGCCAGAGTCTGAGTTGTCTTCGGCTGTCATTCACAAAATGATTGAGTGGCTAAAGGACAATGGAAGCCCTCACAGCCAAGTCCAGGAGTTCATGAGATATACAGCACCTCATCGAGCTGCATGGATTCGATCCACTGGAACAAAAACTATTGAAGAAATCAATAGAGAATATCCCAGACTAAACATTCCTGGAATGGTTCGTGGGGAAATTGCCTTGAAAACCCTTCCTGTCATCCTGCCATCATCGCCCTACCGCACAAATGGGAAAGTTGTGCGTCCAACATATGGTGAAATGAAGCGCGGCTTCATTGACATTCAACCTGTTGGAACGAATGTGGTAGATTACCTGAGCAGTGACACGAGCCAGGATCCACATGTCTTGGTGCTTGGGGACAAAGAGAACTCCTCCCAAGTGTTTGTCATTTTCAACGGAGAGGCAGTTGAACAGGAGACCTTAATTCAAGCAGTGGATTTATGTTTCAAAATGTTTTATGTCTATGACATAAACTACCCAAAACCCTCTGCTCCCATTTGGGAGTTTTTGCAGCATGCAATCTTTAAAATTCCTGGAGGAGTTCCTTCAGCACACTGCTGCCTCCTTAAAAACTTTGTTTTTAGTGTTATTGACCATTAGTAGATCCAGTAGTCAACAGATGTATTTGTAGTTTTATTACTACTATATATTTACAACTCAATGCATACAGTGTATAGTGTAGCTTTTTTAATTAGACCCTGTAAACCGAAAACTACATTATCTACTGGAGCCCCTCAGTGTTCATCCTTTATCTTTTGAAATATACAATGAAGATCTTGTAAATAACCAAAAAAGTAATATTGGGAATTCTGTATTTATCTGTAAACGGAATGAACAACATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_06491360_06505195.mRNA True 3093 mRNA 0.38 12 6490248 6505439

Neighbor

gene id symbol gene type direction distance location
CI01000005_06478442_06481075 GSTA.2, GSTA.1 coding upstream 8859 6478191 ~ 6481389 (+)
CI01000005_06439978_06442729 GSTA.1 coding upstream 47275 6439743 ~ 6442973 (+)
CI01000005_06419247_06426182 GSTA.2, GSTA.1 coding upstream 63720 6419168 ~ 6426528 (+)
CI01000005_06400507_06403709 GSTA.1 coding upstream 86288 6400067 ~ 6403960 (+)
CI01000005_06385508_06394492 NA coding upstream 95683 6385508 ~ 6394565 (+)
CI01000005_06505675_06506160 NA coding downstream 236 6505675 ~ 6506381 (+)
CI01000005_06668264_06682593 FBXO28 coding downstream 162607 6668046 ~ 6682691 (+)
CI01000005_06693330_06699068 DEGS1 coding downstream 186836 6692275 ~ 6699255 (+)
CI01000005_06706460_06706909 NA coding downstream 201021 6706460 ~ 6706909 (+)
CI01000005_06707248_06710543 NA coding downstream 201809 6707248 ~ 6710843 (+)
G39699 NA non-coding upstream 13173 6397875 ~ 6477075 (+)
G39723 NA non-coding upstream 23108 6462747 ~ 6467140 (+)
G39704 NA non-coding upstream 40409 6447175 ~ 6449839 (+)
G39712 NA non-coding upstream 78089 6408596 ~ 6412159 (+)
G39656 NA non-coding upstream 237017 6250929 ~ 6253231 (+)
G39764 NA non-coding downstream 47032 6552471 ~ 6555488 (+)
G39737 NA non-coding downstream 73782 6579221 ~ 6588282 (+)
G39792 NA non-coding downstream 122452 6627891 ~ 6628241 (+)
G39835 NA non-coding downstream 151096 6656535 ~ 6659954 (+)
G39838 NA non-coding downstream 161303 6666742 ~ 6666945 (+)
CI01000005_04735429_04736817 COX20 other upstream 1753391 4735346 ~ 4737082 (+)
G37392 NA other upstream 2766745 3722744 ~ 3723503 (+)
G36291 NA other upstream 4829216 1659733 ~ 1661032 (+)
G36223 NA other upstream 4952444 1503143 ~ 1537804 (+)
G35533 NA other upstream 5966467 491908 ~ 523781 (+)
G39930 NA other downstream 492105 6997544 ~ 6998340 (+)
CI01000005_07600541_07600974 NA other downstream 1092550 7600541 ~ 7602964 (+)

Expression


Co-expression Network