CI01000005_06706460_06706909


Basic Information

Item Value
gene id CI01000005_06706460_06706909
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 6706460 ~ 6706909 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_06706460_06706909.mRNA
GTATTGGAGATCGAAAGAGCTCACCGTATATACAGCAGTGAGCGCGCAAAATCTACCCCTTGTACATTCATCTTCAAGATGCTGCGGTATCAAGATCGGAATGCGATCCTGAATGGAGCCCGAGGTGTTGGACAAATTCTTCATAATGGATCTCCGTTGCTCTTCTTCCCAGACTACAGCAATCAAACTGCGTCCAAGAGGAGATCGATGGCATTGGCGAGGAAGAAGCTAACCCAATTGGGAATAAAGTCTTTTTTGCTTTATCCCGCGGTAGTGAAAGTCATCGATTCACTTTTTGAGACACCGGCGGAGGTTGAAAAGTTCGTCCGCAATCTTTATCCCATCGCAAATTCTTCTCTGAAGGGAGTTTCAGTGCCTGTGTCACGAGAATCCGAGGATAGTGAGCATGAATCTGCAGTTCCCATGGAGGACCTTACTGAGGCGGTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_06706460_06706909.mRNA True 450 mRNA 0.47 1 6706460 6706909

Neighbor

gene id symbol gene type direction distance location
CI01000005_06693330_06699068 DEGS1 coding upstream 7205 6692275 ~ 6699255 (+)
CI01000005_06668264_06682593 FBXO28 coding upstream 23769 6668046 ~ 6682691 (+)
CI01000005_06505675_06506160 NA coding upstream 200079 6505675 ~ 6506381 (+)
CI01000005_06491360_06505195 NA coding upstream 201021 6490248 ~ 6505439 (+)
CI01000005_06478442_06481075 GSTA.2, GSTA.1 coding upstream 225071 6478191 ~ 6481389 (+)
CI01000005_06707248_06710543 NA coding downstream 339 6707248 ~ 6710843 (+)
CI01000005_06805919_06809589 NA coding downstream 98671 6805580 ~ 6809589 (+)
CI01000005_06809700_06812138 NA coding downstream 102791 6809700 ~ 6812450 (+)
CI01000005_06901329_06921880 TP53BP2 coding downstream 194420 6901329 ~ 6921884 (+)
CI01000005_06927239_06932095 NA coding downstream 220330 6927239 ~ 6932195 (+)
G39838 NA non-coding upstream 39515 6666742 ~ 6666945 (+)
G39835 NA non-coding upstream 46506 6656535 ~ 6659954 (+)
G39792 NA non-coding upstream 78219 6627891 ~ 6628241 (+)
G39737 NA non-coding upstream 118178 6579221 ~ 6588282 (+)
G39764 NA non-coding upstream 150972 6552471 ~ 6555488 (+)
G39864 NA non-coding downstream 46900 6753809 ~ 6754042 (+)
G39865 NA non-coding downstream 53869 6760778 ~ 6761083 (+)
G39906 NA non-coding downstream 231614 6938523 ~ 6938754 (+)
G39943 NA non-coding downstream 318108 7025017 ~ 7027390 (+)
G40005 NA non-coding downstream 437966 7144875 ~ 7145896 (+)
CI01000005_04735429_04736817 COX20 other upstream 1969603 4735346 ~ 4737082 (+)
G37392 NA other upstream 2982957 3722744 ~ 3723503 (+)
G36291 NA other upstream 5045428 1659733 ~ 1661032 (+)
G36223 NA other upstream 5168656 1503143 ~ 1537804 (+)
G35533 NA other upstream 6182679 491908 ~ 523781 (+)
G39930 NA other downstream 290635 6997544 ~ 6998340 (+)
CI01000005_07600541_07600974 NA other downstream 891080 7600541 ~ 7602964 (+)

Expression


Co-expression Network