Gene
RNA
| Item | Value |
|---|---|
| gene id | G39864 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000005 |
| NCBI id | null |
| chromosome length | 7630583 |
| location | 6753809 ~ 6754042 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU45173 | True | 234 | lncRNA | 0.44 | 1 | 6753809 | 6754042 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000005_06707248_06710543 | NA | coding | upstream | 42966 | 6707248 ~ 6710843 (+) |
| CI01000005_06706460_06706909 | NA | coding | upstream | 46900 | 6706460 ~ 6706909 (+) |
| CI01000005_06693330_06699068 | DEGS1 | coding | upstream | 54554 | 6692275 ~ 6699255 (+) |
| CI01000005_06668264_06682593 | FBXO28 | coding | upstream | 71118 | 6668046 ~ 6682691 (+) |
| CI01000005_06505675_06506160 | NA | coding | upstream | 247428 | 6505675 ~ 6506381 (+) |
| CI01000005_06805919_06809589 | NA | coding | downstream | 51538 | 6805580 ~ 6809589 (+) |
| CI01000005_06809700_06812138 | NA | coding | downstream | 55658 | 6809700 ~ 6812450 (+) |
| CI01000005_06901329_06921880 | TP53BP2 | coding | downstream | 147287 | 6901329 ~ 6921884 (+) |
| CI01000005_06927239_06932095 | NA | coding | downstream | 173197 | 6927239 ~ 6932195 (+) |
| CI01000005_06954470_06955113 | NA | coding | downstream | 200428 | 6954470 ~ 6955248 (+) |
| G39838 | NA | non-coding | upstream | 86864 | 6666742 ~ 6666945 (+) |
| G39835 | NA | non-coding | upstream | 93855 | 6656535 ~ 6659954 (+) |
| G39792 | NA | non-coding | upstream | 125568 | 6627891 ~ 6628241 (+) |
| G39737 | NA | non-coding | upstream | 165527 | 6579221 ~ 6588282 (+) |
| G39764 | NA | non-coding | upstream | 198321 | 6552471 ~ 6555488 (+) |
| G39865 | NA | non-coding | downstream | 6736 | 6760778 ~ 6761083 (+) |
| G39906 | NA | non-coding | downstream | 184481 | 6938523 ~ 6938754 (+) |
| G39943 | NA | non-coding | downstream | 270975 | 7025017 ~ 7027390 (+) |
| G40005 | NA | non-coding | downstream | 390833 | 7144875 ~ 7145896 (+) |
| G40035 | NA | non-coding | downstream | 479755 | 7233797 ~ 7234020 (+) |
| CI01000005_04735429_04736817 | COX20 | other | upstream | 2016952 | 4735346 ~ 4737082 (+) |
| G37392 | NA | other | upstream | 3030306 | 3722744 ~ 3723503 (+) |
| G36291 | NA | other | upstream | 5092777 | 1659733 ~ 1661032 (+) |
| G36223 | NA | other | upstream | 5216005 | 1503143 ~ 1537804 (+) |
| G35533 | NA | other | upstream | 6230028 | 491908 ~ 523781 (+) |
| G39930 | NA | other | downstream | 243502 | 6997544 ~ 6998340 (+) |
| CI01000005_07600541_07600974 | NA | other | downstream | 843947 | 7600541 ~ 7602964 (+) |
