CI01000005_06505675_06506160


Basic Information

Item Value
gene id CI01000005_06505675_06506160
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 6505675 ~ 6506381 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_06505675_06506160.mRNA
ATGTTGAGCCTGCATGGATTCCAGCCTTCCTTCGGCACATCGATGGGAACCGAGTGGACAGTGCGCAGATATGAGATCGCAGCTCTTCACAGACATGCAGCCTGGAGAAACTGCAGCACCAGATCTTTAAAGAGAGACCCAGCAGAAGGAGATCTACCCAGTCACCTGCGCAATGGAGAAAGAGGGAAGCGGCTTTGCTTTGACACTCGCGACTTTTCCCCGGAGGAGCTGTCAGTCATTCAGGTCAGCAGGAACCTGCGGGTCTGCGACAAGACCCAGAAGAAGCCAGAGAATCATGGGAAAGTCTTGTACAGAATCCTGGAGTTCAGACGGGTGTTTGATCTGCCTGAAGGAGTGAATCTTGAGGAAGTGTCCTGCTCTATAGCTGATAATGGAAAGCTCTACATACAGGCGCCAGTAAATCAGAGACCTGAAGCAGCTGAGAGGATGATTTCCACTGACTCTGAAGACTATCTGGATGCCTGATACCATGACTGCTCAGAAGACGGAGTTTCATTTTTATATAAATATTGTTCTTGTTAATTGTTTTGTAGTCTTTAAATAATATATGCAAAAGTTTTTTTTTTTTATTGATTATTATTTTTAGTGCACAAATTTACACTTCCTGTTCATGATTACATCTCTTCATAATTAAGAAATGTAAATCAGAAGCTTTTTGTAAATCTATATGAGGGGAAATAATTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_06505675_06506160.mRNA True 707 mRNA 0.43 1 6505675 6506381

Neighbor

gene id symbol gene type direction distance location
CI01000005_06491360_06505195 NA coding upstream 236 6490248 ~ 6505439 (+)
CI01000005_06478442_06481075 GSTA.2, GSTA.1 coding upstream 24286 6478191 ~ 6481389 (+)
CI01000005_06439978_06442729 GSTA.1 coding upstream 62702 6439743 ~ 6442973 (+)
CI01000005_06419247_06426182 GSTA.2, GSTA.1 coding upstream 79147 6419168 ~ 6426528 (+)
CI01000005_06400507_06403709 GSTA.1 coding upstream 101715 6400067 ~ 6403960 (+)
CI01000005_06668264_06682593 FBXO28 coding downstream 161665 6668046 ~ 6682691 (+)
CI01000005_06693330_06699068 DEGS1 coding downstream 185894 6692275 ~ 6699255 (+)
CI01000005_06706460_06706909 NA coding downstream 200079 6706460 ~ 6706909 (+)
CI01000005_06707248_06710543 NA coding downstream 200867 6707248 ~ 6710843 (+)
CI01000005_06805919_06809589 NA coding downstream 299199 6805580 ~ 6809589 (+)
G39699 NA non-coding upstream 28600 6397875 ~ 6477075 (+)
G39723 NA non-coding upstream 38535 6462747 ~ 6467140 (+)
G39704 NA non-coding upstream 55836 6447175 ~ 6449839 (+)
G39712 NA non-coding upstream 93516 6408596 ~ 6412159 (+)
G39656 NA non-coding upstream 252444 6250929 ~ 6253231 (+)
G39764 NA non-coding downstream 46090 6552471 ~ 6555488 (+)
G39737 NA non-coding downstream 72840 6579221 ~ 6588282 (+)
G39792 NA non-coding downstream 121510 6627891 ~ 6628241 (+)
G39835 NA non-coding downstream 150154 6656535 ~ 6659954 (+)
G39838 NA non-coding downstream 160361 6666742 ~ 6666945 (+)
CI01000005_04735429_04736817 COX20 other upstream 1768818 4735346 ~ 4737082 (+)
G37392 NA other upstream 2782172 3722744 ~ 3723503 (+)
G36291 NA other upstream 4844643 1659733 ~ 1661032 (+)
G36223 NA other upstream 4967871 1503143 ~ 1537804 (+)
G35533 NA other upstream 5981894 491908 ~ 523781 (+)
G39930 NA other downstream 491163 6997544 ~ 6998340 (+)
CI01000005_07600541_07600974 NA other downstream 1091608 7600541 ~ 7602964 (+)

Expression


Co-expression Network