CI01000006_03858455_03862082 (RCE1B)


Basic Information

Item Value
gene id CI01000006_03858455_03862082
gene name RCE1B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 3858455 ~ 3862368 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_03858455_03862082.mRNA
ATGAACTGCAAGCAGCTTAAGCTCATTATCTTCTTTTCAGACAGCAGCATGTTTCTTTGGAATAACGGACGATGTTATCAATCAAAACCCTTTCAGAGACTTTTGATGGAGAGTGTTGGATATCTGTTAAGTGTTGTTTACTGCTTGCCTGTTTGTATGTTGGGAGTTTGTATGTATGGAGGGGCAACTTACCCAGCTGTTTCACCACTGGTTGTACTGGCATGGACTCATTACATGAAAGTCAGGGTGCTTTTTCTTGGACCTCTGACCCAGTTGGCAATTGAGAGCCCAAGAGGACTTTTTCATGAAATTAAAACAGCCTTGAATTCTCGGTCTTGGAGCAAGTGTGTGAAGGATTTACGATGGCTGAGGAACCACGTGGTGGCTCCATTAACAGAGGAGTTCGTCTTTCGAGCGTGTATGATTCCCATGTTGGTACCATGCGTCGGTCCCACTGCTGCCATCTTCATCAGTCCGCTCTTCTTCGGTGTGGCACATTTCCATCATATCATTGAACAGCTTCGCTTTGGACAAGACACTGTGTTTGAGATACTAATTTGTGCAGCTTTCCAGTTCACTTATACCTCAATTTTTGGAGCTTACACTGCCTTCATATTCATAAGGACAGATCCTGCTTTCTACGGCATGACCCCCATCTGCAGTCTACTGCTTACACCTCGCTCTGCCTGCACATGACACATCTTCATGGTGCCTGAGTGGAAATGTACCTTAAAATATTTAAAAACATGATGGGGCAAGAGATCCCTTCCTGAGAGCATCAAAGACAGTAAATGTAGCATGTTGCTTTCATGCAAAAGACTCATGAAAGCATACATTCATCAGCATAGATGCTAAGTTAATGACTGTCATATTTCATTTATTTGCCTTTTTGTGGTAATAGTTTTCAAATTGGAGTGTAGATCAGTGGCTCATTCGAATGATTTATTTTTTCATGTTTGCCCCTTATTTCTCTTTCATTCAA

Function

symbol description
rce1b Predicted to enable metalloendopeptidase activity. Predicted to be involved in CAAX-box protein processing. Predicted to act upstream of or within proteolysis. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be integral component of endoplasmic reticulum membrane. Orthologous to human RCE1 (Ras converting CAAX endopeptidase 1).

GO:

id name namespace
GO:0004222 metalloendopeptidase activity molecular_function

KEGG:

id description
K08658 RCE1, FACE2; prenyl protein peptidase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_03858455_03862082.mRNA True 982 mRNA 0.42 7 3858455 3862368

Neighbor

gene id symbol gene type direction distance location
CI01000006_03837017_03839129 NA coding upstream 19204 3837017 ~ 3839251 (+)
CI01000006_03808166_03810807 NA coding upstream 47648 3808085 ~ 3810807 (+)
CI01000006_03760594_03770397 NXF1 coding upstream 87658 3760275 ~ 3770797 (+)
CI01000006_03744756_03759381 NA coding upstream 98630 3744324 ~ 3759825 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L coding upstream 122717 3734554 ~ 3736035 (+)
CI01000006_03883341_03885377 NA coding downstream 20421 3882789 ~ 3886026 (+)
CI01000006_03888048_03891012 NA coding downstream 25005 3887373 ~ 3891478 (+)
CI01000006_03893432_03940454 ANKHD1 coding downstream 31064 3893432 ~ 3940961 (+)
CI01000006_03941900_03945253 EIF4EBP3 coding downstream 78931 3941299 ~ 3945701 (+)
CI01000006_04034081_04045505 NA coding downstream 171713 4034081 ~ 4047794 (+)
G41499 NA non-coding upstream 4579 3850469 ~ 3853876 (+)
G41743 NA non-coding upstream 8429 3849793 ~ 3850026 (+)
G41732 NA non-coding upstream 18449 3839751 ~ 3840006 (+)
G41729 NA non-coding upstream 27329 3830904 ~ 3831126 (+)
G41716 NA non-coding upstream 81552 3776605 ~ 3776903 (+)
G41744 NA non-coding downstream 1763 3864131 ~ 3864359 (+)
G41747 NA non-coding downstream 7791 3870159 ~ 3871229 (+)
G41751 NA non-coding downstream 86911 3949279 ~ 3950691 (+)
G41791 NA non-coding downstream 147336 4009704 ~ 4009992 (+)
G41792 NA non-coding downstream 150409 4012777 ~ 4013031 (+)
G41591 NA other upstream 1019034 2836167 ~ 2839421 (+)
G41424 NA other upstream 1197885 2645662 ~ 2660570 (+)
G41170 NA other upstream 2162634 1692065 ~ 1695821 (+)
G40768 NA other upstream 3365429 488407 ~ 493026 (+)
G41996 NA other downstream 1254838 5117206 ~ 5124149 (+)
G43896 NA other downstream 1907721 5770089 ~ 5771775 (+)
CI01000006_06104927_06109730 NA other downstream 2246116 6104927 ~ 6109820 (+)
CI01000006_06122278_06122736 NA other downstream 2259667 6122035 ~ 6122751 (+)
CI01000006_07167131_07168925 NA other downstream 3304421 7166778 ~ 7168925 (+)

Expression


Co-expression Network