CI01000006_06150156_06150788


Basic Information

Item Value
gene id CI01000006_06150156_06150788
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 6149792 ~ 6150941 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_06150156_06150788.mRNA
ATAGGTCTATCTTGGCTGAATAAATTTTGAAGTGTTATTTTAACATTTCACAATTTTAATTGTTATAAAAATTGTGTTGTGTATAGGAACTGCAGTCTCAAAAAGGAGCAACCAAAGTTCATTGTCATCTCATACTGTTGTGTAAGAGCCAAAATGCCAGTGGAATTCAATGGATGGGAGGCATATTGCGATAAGTCAAAGCACCTTAAACCAGGTCAAGAACCCAAAAAGAGCCACGGCTACACTATGTACCATGGGACACTCAAAACCAATGCCCCAGCTATTATATCATCAGGGTTTCGGCCCTCTTCTGGGGGAACATTGGGTCCTGGAGTCTACTGTAGTAGGGACATTAACAAAGCAATGGGTTATCCAGCATGTGCTCCCAATGACAGAGTTGTGTTAAAGCTACGAGTAAGAGTGGGTAAAGTGAAGAGGATTGACGCGCAAAGCCTGAACCTGATGACCTCATGGCATCAGAATGGATATGATACGGCCTGGTTACCCGCATCTGTTTTTGGACTTGAAGAGGACTGTGTTTTTGACCCAAAGAGACTCACTGTGATTGGGATAGCCCATTGCACAGACTCCAGTGCGAAGAGTTCTCTGGAGAGTCTCATAAAGCAGAAAAGCCAACCGCAGGATCCAAAGGGGGAAGATCTGAAGTTGTGTAAAGGCTGTGGAATGCAAACACAGGATAAACACACAATGGAGAAATGTTGGTCCTGTAAAGCATCCATATGCCCCTTCATGAAGAATCATGTTTGTCGAAGGAAAGGGAAGTAACCATTCCTGAATACTCCAATTTAGTTAAATGATACACTTTCTTTAAATATAATCTGTGGAGTGATATTTAGCTTTGTTAAAGGCACTTAATAAATAAAACTTTTTTATTACTATATTTGAGGTAATTTTTAAAAAAAAAAAATTACTGCAGAACAGTAAGGTTTAAATTACTGTTTTGATATATTTTTTTAAAATTATTATTATTAATTTGTTTGGGGTTTTTTAATAGATATTGGATGTTGAACCTATTTATTGATATTGGATATTGTATAGTGAACCAAAATTGTAAATTTAGCATTTAACAAATTTAATGAAATTCTGCTAATGATTCATAATCACTAGCAGTTAATTTGATCAGATTAAA

Function

NR:

description
Gig2-like protein CauA

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_06150156_06150788.mRNA True 1150 mRNA 0.37 1 6149792 6150941

Neighbor

gene id symbol gene type direction distance location
CI01000006_06113827_06119446 NA coding downstream 28493 6113684 ~ 6121299 (-)
CI01000006_06061727_06090026 ARHGAP42A, ARHGAP42 coding downstream 59766 6061727 ~ 6090026 (-)
CI01000006_06032635_06035821 NA coding downstream 113971 6031720 ~ 6035821 (-)
CI01000006_06022411_06025104 BIRC2 coding downstream 123999 6022411 ~ 6025793 (-)
CI01000006_06002218_06004661 NA coding downstream 145059 6002184 ~ 6004733 (-)
CI01000006_06154160_06156372 NA coding upstream 3157 6154098 ~ 6156372 (-)
CI01000006_06194768_06199541 CHEK1 coding upstream 43553 6194494 ~ 6199541 (-)
CI01000006_06261946_06262932 NA coding upstream 110829 6261556 ~ 6262978 (-)
CI01000006_06272106_06273111 CAPSL, CAPSLB coding upstream 121130 6272071 ~ 6273111 (-)
CI01000006_06276720_06284605 LMBRD2B, LMBRD2 coding upstream 124654 6275595 ~ 6285152 (-)
G44415 NA non-coding downstream 6703 6128337 ~ 6143089 (-)
G44536 NA non-coding downstream 38956 6110602 ~ 6110836 (-)
G44406 NA non-coding downstream 41486 6104435 ~ 6108306 (-)
G44436 NA non-coding downstream 133863 6010781 ~ 6015929 (-)
G44552 NA non-coding upstream 34787 6185728 ~ 6187020 (-)
G44557 NA non-coding upstream 42076 6193017 ~ 6193311 (-)
G44570 NA non-coding upstream 54123 6205064 ~ 6205416 (-)
G44568 NA non-coding upstream 114003 6264944 ~ 6265907 (-)
CI01000006_04560607_04560993 NA other downstream 1587724 4559509 ~ 4562068 (-)
G43549 NA other downstream 1794364 4352510 ~ 4355428 (-)
G43102 NA other downstream 3215808 2908451 ~ 2933984 (-)
CI01000006_02624725_02626124 COX8A other downstream 3523606 2624436 ~ 2626776 (-)
G42934 NA other downstream 3567586 2523776 ~ 2582206 (-)
CI01000006_06974359_06976736 NA other upstream 822283 6973224 ~ 6976872 (-)
CI01000006_07500281_07507754 NA other upstream 1352204 7500246 ~ 7507976 (-)
CI01000006_10453630_10483241 NA other upstream 4331915 10453613 ~ 10484006 (-)
G47658 NA other upstream 4879970 11030911 ~ 11033127 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 other upstream 5499422 11650363 ~ 11654424 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location