CI01000006_08847431_08853895


Basic Information

Item Value
gene id CI01000006_08847431_08853895
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 8846260 ~ 8853921 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_08847431_08853895.mRNA
GTATAAAAATACACTTATCATTAAAAAAAAGTTTAGGGCCAGGAAACTTTCTATTCGTCACAGAATCTTGAGGAAAAAAAAAGTCGTTTTTTTTTTTTTTTACAAAAATATTAAACCAGCACCACAGTTTTCAACATATAATAAGAAATAATAAGAAATGTTTCCAGTACCAAATAATTAAAATGATTTCTGAAGGATCATGTGACACTGAAGACTAGAGTAATGGCTGTTGGAAATTCAGCTTTGCCATGACAGGAATGAATTAAATTTTTTAAAATATATTAGATTTCAGAATAAATTAAAAGGGAAAAAACTGTTATTTTAAATTGCAATCATATTTCATAATATTACTGCACTTTAGATCATATAAATACAGCCTTGGTAAGCATAAGAGAAAAACAAATATTACAGACCCCAAACTTTTAAACAGTAGTGTTCATATTCTATATTCTAATAGAATAAAAATTAATCTTGCTATTAACCAAAATACAAAAATAAGTCCAATCATTTAGAATAACAGCACTTTTCTCAACAAGCTGTGTGATTTGATGCATCACTCACGTCTTTAGCACAAATGCGGGACAAGTTACCAAATTCCACCATTAGAACCACTAATAACTGCATTCACACACACAGAACCTTGATCTGCCTCAAACTGTCTAAGAATTTCTCAGAAAAGCTTCATCATTACAACTCTGCTCGTCCCCCACAGATCTGCTTTCCTTTGTAGCTTTGTGCCGCAGCTATGACACATTTCAAGACTTTGCATAATGCTGAAAGTAATCAAATGAGTTTAGCAGGAGGGTGCGGGCTTATTTAAGACCAAGAGAGGTGGTTCTGCTGGTGGCTGGTGCAGCAAGGGTGGAATCTCCTCAGGAGAGCTATCTGACAGTCGAGGACATGATTAGAGCGGGAGCGGGACATGACAGGGAGGGTAATTACGCACTGCCGCCCATGGCATCCCTCCCCGGAGAGCCGGAGCGAGACTCCCATCACTCCTTAGCGGAGCTCAGCGATCCCTCTCCTCTGTGACAGCATAAGAAGAGGCAAAATCTACACAATACCCGTGCCGCACAAAAAAAGACAAGCAGCCGGGGTCCCAGCGTGGAACAGAAACGGTACCGAAAAGCATTCATTTGAAATCCACAAATGAATTAGCGATAATGCCCGAATGAGAACGAGTCCTGTGGCGCTGGCTTTAATGCTAACAGAATGGCCTGCTGAGGTAAAGGAAGGGTTTATTAAAAAGATCTATGCTGCTCTGGCTTTTCTGGTCAGCTCTCTCTTGGGTAGATCAGACTCTTTGTTACCACAAACAAACAGGAAGTGTAGATTTAACACAGTTCTTCCTCTTGCTCACAGGATTGCGCAAATTGAGGAGATTGAATCAAAGGCAGGCAGGCAGGCAGTGGACGATTTTATCTGGCAAAACCACACACAGAGAGAAATTGTACATGTGATTGCAAACTTTACACTAGGGGATACACAGATTAGTACAGAGTGTATCGAGAGAACAGGTCTCACTAATTCATGTAAATCTTCCCGAGTGCCGCCCGCCGTGGGAGTTAGGGTCCCGTTAATGAAACACAAATGGGGAATGATTGGGTTTTGGCGAGCTGCTAAAAGAACTGCGGAGGCCTCAGGGGTGGGCCGCTCCAGTCGTCTACCTCCTCCCCCCGGAAAAGTGGAGAACAGTTGTGCGGACCCCTGGGGTAAGAGCAGGGAGGGGGGTCTGCTCTGGGAAACTATGCATCTACGTGAGGCAGGAAGAGGCCTTGCAGGCCAAGGGGAATGCGTGCGCCGCACCGGAGGAGGCAGCGCGCGTGTGCGTGCAAGCGTGTTTGTGTGTGTATATGGAAGCGCGCTATACGTCTCATGGGGAAAGTGTGGTTTCGATCCTCTCCCACCATCCTCCCTTCTGCCTGCAACAAACAAACAAACAACAACATGGAACCAGCTAGCTGCACTTCCAAGACAAATGACCGACATTAGTGAGGAAAAGACGTATGAAACCAAATTCACTTTTGATGAAGTGGAGGCAGGAAAACGGATAGCCCAGTCCGCATCGTGTCAAAAGCAGCACATATGCCAAAAAACACAAAAAGAAGCTGAAAAGGACATTAAAGGGAAGCTTTTGCTGGGTTTTTCCACAAGTTGTGAGAGCTCTTTTACCGCTCAGGCTTACAAACATCGACTCCCATTTTCAAGAGCCAAAAATACCATTAAAAGAAAAGATGAGAAATCCACTGGCACTGTGCTAAATCTTTCTCTTGAAGTGTTCTCATGGTTACAGATAAACACCATAAAAGGCTGTTTTGATTCACAAAAACAAGTGAACTATTAAACTATTAAAAACATGAATCAATATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_08847431_08853895.mRNA True 2370 mRNA 0.43 6 8846260 8853921

Neighbor

gene id symbol gene type direction distance location
CI01000006_08757702_08765273 WDR5, WDR5B, WDR5.L, BRAFLDRAFT_281422 coding upstream 80198 8757419 ~ 8766062 (+)
CI01000006_08673737_08674685 NA coding upstream 171146 8673580 ~ 8675114 (+)
CI01000006_08528828_08531392 NA coding upstream 314803 8528828 ~ 8531457 (+)
CI01000006_08366730_08400944 NA coding upstream 443935 8366090 ~ 8402325 (+)
CI01000006_08305571_08341681 NA coding upstream 504579 8305571 ~ 8341681 (+)
CI01000006_09004949_09014310 GSNA, GSN coding downstream 150753 9004674 ~ 9014589 (+)
CI01000006_09066050_09070383 BARH1, BARHL1B, BARHL1 coding downstream 212041 9065962 ~ 9070581 (+)
CI01000006_09098943_09103197 NA coding downstream 244761 9098682 ~ 9104172 (+)
CI01000006_09105004_09106470 NA coding downstream 250294 9104215 ~ 9106963 (+)
CI01000006_09107491_09114820 GTF3C4 coding downstream 252905 9106826 ~ 9115071 (+)
G45413 NA non-coding upstream 95764 8749911 ~ 8750496 (+)
G45543 NA non-coding upstream 106662 8682981 ~ 8739598 (+)
G45630 NA non-coding upstream 140593 8705333 ~ 8705667 (+)
G45528 NA non-coding upstream 271516 8572694 ~ 8574744 (+)
G45438 NA non-coding upstream 512782 8332579 ~ 8333478 (+)
G45734 NA non-coding downstream 69909 8923830 ~ 8924046 (+)
G45748 NA non-coding downstream 101378 8955299 ~ 8955505 (+)
G45765 NA non-coding downstream 143161 8997082 ~ 8997321 (+)
G45769 NA non-coding downstream 176439 9030360 ~ 9037570 (+)
G45778 NA non-coding downstream 187046 9040967 ~ 9041168 (+)
G45416 NA other upstream 11563 8818814 ~ 8834697 (+)
G45355 NA other upstream 633872 8209555 ~ 8212388 (+)
CI01000006_08198328_08199463 NA other upstream 646115 8197881 ~ 8200145 (+)
G45336 NA other upstream 824309 8019342 ~ 8021951 (+)
G45265 NA other upstream 925905 7883867 ~ 7920355 (+)
G46652 NA other downstream 1302658 10156579 ~ 10159251 (+)
G47145 NA other downstream 1631437 10485358 ~ 10511806 (+)
G47159 NA other downstream 2562308 11416229 ~ 11521703 (+)
G47318 NA other downstream 2770346 11624267 ~ 11638252 (+)
G48094 NA other downstream 3423699 12277620 ~ 12279541 (+)

Expression


Co-expression Network