G45734


Basic Information

Item Value
gene id G45734
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 8923830 ~ 8924046 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU51994
TTTGAATCAGTGATATCGTTGGCTATCTGATTTTCCTTAGAAGGGGCCCCTGTGCTTTTTCGCTCTCTCACTCACTCTCTCCTTCTCTTTTTCTAGGGTTCTGATATTTTGTCAGACTTGCAGAGGGAGTCATTGGCAGGCTAACTTCTTAACGCAGTGGGTCAGGGGCAGGTCAGCCTGTAGAAACCCCCATGATGATCATCTAGAGGCAGGAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51994 True 217 lncRNA 0.47 1 8923830 8924046

Neighbor

gene id symbol gene type direction distance location
CI01000006_08847431_08853895 NA coding upstream 69909 8846260 ~ 8853921 (+)
CI01000006_08757702_08765273 WDR5, WDR5B, WDR5.L, BRAFLDRAFT_281422 coding upstream 157768 8757419 ~ 8766062 (+)
CI01000006_08673737_08674685 NA coding upstream 248716 8673580 ~ 8675114 (+)
CI01000006_08528828_08531392 NA coding upstream 392373 8528828 ~ 8531457 (+)
CI01000006_08366730_08400944 NA coding upstream 521505 8366090 ~ 8402325 (+)
CI01000006_09004949_09014310 GSNA, GSN coding downstream 80628 9004674 ~ 9014589 (+)
CI01000006_09066050_09070383 BARH1, BARHL1B, BARHL1 coding downstream 141916 9065962 ~ 9070581 (+)
CI01000006_09098943_09103197 NA coding downstream 174636 9098682 ~ 9104172 (+)
CI01000006_09105004_09106470 NA coding downstream 180169 9104215 ~ 9106963 (+)
CI01000006_09107491_09114820 GTF3C4 coding downstream 182780 9106826 ~ 9115071 (+)
G45413 NA non-coding upstream 173334 8749911 ~ 8750496 (+)
G45543 NA non-coding upstream 184232 8682981 ~ 8739598 (+)
G45630 NA non-coding upstream 218163 8705333 ~ 8705667 (+)
G45528 NA non-coding upstream 349086 8572694 ~ 8574744 (+)
G45438 NA non-coding upstream 590352 8332579 ~ 8333478 (+)
G45748 NA non-coding downstream 31253 8955299 ~ 8955505 (+)
G45765 NA non-coding downstream 73036 8997082 ~ 8997321 (+)
G45769 NA non-coding downstream 106314 9030360 ~ 9037570 (+)
G45778 NA non-coding downstream 116921 9040967 ~ 9041168 (+)
G45787 NA non-coding downstream 129938 9053984 ~ 9054296 (+)
G45416 NA other upstream 89133 8818814 ~ 8834697 (+)
G45355 NA other upstream 711442 8209555 ~ 8212388 (+)
CI01000006_08198328_08199463 NA other upstream 723685 8197881 ~ 8200145 (+)
G45336 NA other upstream 901879 8019342 ~ 8021951 (+)
G45265 NA other upstream 1003475 7883867 ~ 7920355 (+)
G46652 NA other downstream 1232533 10156579 ~ 10159251 (+)
G47145 NA other downstream 1561312 10485358 ~ 10511806 (+)
G47159 NA other downstream 2492183 11416229 ~ 11521703 (+)
G47318 NA other downstream 2700221 11624267 ~ 11638252 (+)
G48094 NA other downstream 3353574 12277620 ~ 12279541 (+)

Expression


Co-expression Network