Gene
RNA
| Item | Value |
|---|---|
| gene id | G45438 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 8332579 ~ 8333478 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU51658 | True | 716 | lncRNA | 0.34 | 2 | 8332579 | 8333478 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_08222787_08225568 | MED15 | coding | upstream | 107011 | 8222787 ~ 8225568 (+) |
| CI01000006_08198328_08199463 | NA | coding | upstream | 132913 | 8197881 ~ 8200145 (+) |
| CI01000006_08184916_08188512 | NEFMA | coding | upstream | 143280 | 8184799 ~ 8189299 (+) |
| CI01000006_08108713_08122179 | NA | coding | upstream | 210215 | 8108563 ~ 8122364 (+) |
| CI01000006_08025159_08032131 | NA | coding | upstream | 299956 | 8025159 ~ 8032623 (+) |
| CI01000006_08366730_08400944 | NA | coding | downstream | 32612 | 8366090 ~ 8402325 (+) |
| CI01000006_08528828_08531392 | NA | coding | downstream | 195350 | 8528828 ~ 8531457 (+) |
| CI01000006_08673737_08674685 | NA | coding | downstream | 340102 | 8673580 ~ 8675114 (+) |
| CI01000006_08757702_08765273 | WDR5, WDR5B, WDR5.L, BRAFLDRAFT_281422 | coding | downstream | 423941 | 8757419 ~ 8766062 (+) |
| CI01000006_08847431_08853895 | NA | coding | downstream | 512782 | 8846260 ~ 8853921 (+) |
| G45359 | NA | non-coding | upstream | 94173 | 8234738 ~ 8238406 (+) |
| G45392 | NA | non-coding | upstream | 173112 | 8159245 ~ 8159467 (+) |
| G45391 | NA | non-coding | upstream | 173686 | 8158636 ~ 8158893 (+) |
| G45356 | NA | non-coding | upstream | 175044 | 8154796 ~ 8157535 (+) |
| G45381 | NA | non-coding | upstream | 186499 | 8133207 ~ 8146080 (+) |
| G45528 | NA | non-coding | downstream | 239216 | 8572694 ~ 8574744 (+) |
| G45543 | NA | non-coding | downstream | 349503 | 8682981 ~ 8739598 (+) |
| G45630 | NA | non-coding | downstream | 371855 | 8705333 ~ 8705667 (+) |
| G45413 | NA | non-coding | downstream | 416433 | 8749911 ~ 8750496 (+) |
| G45734 | NA | non-coding | downstream | 590352 | 8923830 ~ 8924046 (+) |
| G45355 | NA | other | upstream | 120191 | 8209555 ~ 8212388 (+) |
| G45336 | NA | other | upstream | 310628 | 8019342 ~ 8021951 (+) |
| G45265 | NA | other | upstream | 412224 | 7883867 ~ 7920355 (+) |
| G45178 | NA | other | upstream | 648908 | 7607604 ~ 7683671 (+) |
| G45416 | NA | other | downstream | 485336 | 8818814 ~ 8834697 (+) |
| G46652 | NA | other | downstream | 1823101 | 10156579 ~ 10159251 (+) |
| G47145 | NA | other | downstream | 2151880 | 10485358 ~ 10511806 (+) |
| G47159 | NA | other | downstream | 3082751 | 11416229 ~ 11521703 (+) |
| G47318 | NA | other | downstream | 3290789 | 11624267 ~ 11638252 (+) |
