CI01000006_09891107_09897750


Basic Information

Item Value
gene id CI01000006_09891107_09897750
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 9891107 ~ 9897763 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_09891107_09897750.mRNA
TTCATGGCATGGGCCAAGTTTCATTGGATTTCGGCGGCAATGCTTATGATTACCACAAGGGGCTCTTAAAGAAATGCATATTAAAACAATATCTCAAGGCCCATCCCTCGGTTCGTGTCAGAGGAACAGAACACGCATACACACCTGTGCTGTGTCAGGATGAGAAGTGTTTGGGGCAGGAGAAAGGAGTGCATATGCACTGCCCACTCTGTTCTGTGGCTGAGGCTTACCAAGATCCCGTCATCCTGCGAGCTCACTTTCGCATCAAACATGTGGACAAAGGCATTGACTTTGCAGGCTTGAAGGTGCTGCGTTGCTGTATCCATTGTGAGATTGTGGGAACTATTAAAGGAGAAAAGAGGTTTAAAGGTGCGCATTGGCACTGTTACCGCTGTAGAAATGGTTTCAACAGGAGGGACGAGGCCATCAAACACTATAAAACACACTTCCGAAATCCCCACACCACATTCCAGATCCAAGTGACACAGAATGTGAACTGCCGACAGTATTATGGTGAGAGCTCAGAGGCTCATGCTAAAGCATATGAAGGGCTGGCAGTGAGTCTTGGATCAGGAGGAGATGGCACAAGCATTGGATCCATATTAACTCACCCCATCCTGACCACCGGCACTGAAACCCTATTGACTGTGGAACCAAAGGAAGATGGTGAGAGAAATGGGATCCCACTTGGTGCTGAGGAGGAGGTGGGGTCTTCCCAGAATTCATGTGATGGGACACAGACTCTTGTTCTTATGGACCCTGATGGACAGGGAAACAGTGTAATCTATGACACAGCTACTGGTATCATTACTGAACAGGACGCAGAAGGTTTGGAACAGACCCTGCTACAGAAACGACTCCTGGAGCTCCACCAACAGATGTACGCACTCCGTCAAGAGAAGGAGACTATGGAGAAGACACTACAAGCTGAGATTAAACAGCTCAAAGAACAGGTTGCAAGTCTGGTTCAGTCTAATGTTCGGATGTTTGAGGAACTGCAAGCATACCGATGTCCAGATCACAGCCAGCAGAAGGTGGCCAAGCTTATGGAAAACCTTGAAGCTCAGCACAAGGAGCTCCTGCAGGCCCAGTTGGCCTCACTCAGGAGGGAGGTCCTGTCAGGAGCAAATAACATGCCAATCAATGGCCACAAGGGGGCACTGGAGCTCAATGTGGATCCAGAAGAGCCACAAACTGAAGTTATCAGTGGCAATTTAACAGAACTGGAGGATATGGATGTACAGTTACAAACTGAGCAGCATGAGGCACTAAGATCCACAGAGCTTGAACTAGTGCCAGCTGATACAATGCCCTGTTTGGAGAGCCCCGACTTGGACTTAAATTTGCCAAACACTGGCTTGACTACATCTAAGGTTTTAGAGGATAAACGGGAAGTGTCATTGTCCCTTGTATCGTCTAAAAAGCGCAGCTCACCGGATGACTCAGTAGACACAGTTGAAAGCAAAGTACAAAGAGTCAGCTGAGAATGACTTTACA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_09891107_09897750.mRNA True 1497 mRNA 0.48 8 9891107 9897763

Neighbor

gene id symbol gene type direction distance location
CI01000006_09884959_09889794 NA coding upstream 818 9884439 ~ 9890289 (+)
CI01000006_09836923_09844045 NA coding upstream 46759 9836923 ~ 9846207 (+)
CI01000006_09712289_09783579 UNC5DA coding upstream 107528 9712289 ~ 9783579 (+)
CI01000006_09569228_09574340 NA coding upstream 316046 9568280 ~ 9575061 (+)
CI01000006_09497508_09511925 NA coding upstream 378387 9496806 ~ 9512720 (+)
CI01000006_09910027_09913958 NA coding downstream 11607 9909370 ~ 9914104 (+)
CI01000006_09918611_09921465 MZT2B coding downstream 20848 9918611 ~ 9921793 (+)
CI01000006_09998680_10008491 LHX5 coding downstream 100917 9998680 ~ 10009048 (+)
CI01000006_10177090_10192651 NA coding downstream 279327 10177090 ~ 10193519 (+)
CI01000006_10363884_10364804 NA coding downstream 466033 10363796 ~ 10365571 (+)
G46569 NA non-coding upstream 34012 9856747 ~ 9857095 (+)
G46566 NA non-coding upstream 39273 9851629 ~ 9851834 (+)
G46565 NA non-coding upstream 39649 9851135 ~ 9851458 (+)
G46662 NA non-coding downstream 89151 9986914 ~ 9987133 (+)
G46665 NA non-coding downstream 91218 9988981 ~ 9989253 (+)
G46671 NA non-coding downstream 95980 9993743 ~ 9994022 (+)
G46677 NA non-coding downstream 115127 10012890 ~ 10013116 (+)
G46680 NA non-coding downstream 118587 10016350 ~ 10017401 (+)
G45416 NA other upstream 1056410 8818814 ~ 8834697 (+)
G45355 NA other upstream 1678719 8209555 ~ 8212388 (+)
CI01000006_08198328_08199463 NA other upstream 1690962 8197881 ~ 8200145 (+)
G45336 NA other upstream 1869156 8019342 ~ 8021951 (+)
G45265 NA other upstream 1970752 7883867 ~ 7920355 (+)
G46652 NA other downstream 258816 10156579 ~ 10159251 (+)
G47145 NA other downstream 587595 10485358 ~ 10511806 (+)
G47159 NA other downstream 1518466 11416229 ~ 11521703 (+)
G47318 NA other downstream 1726504 11624267 ~ 11638252 (+)
G48094 NA other downstream 2379857 12277620 ~ 12279541 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location