G46665


Basic Information

Item Value
gene id G46665
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 9988981 ~ 9989253 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU53059
CATTTCATTCATTAATACAGTTTATTCAATATAGTTAAAAAAAAAATGGTAATAAAATATGACAAGATCTCAGAGTGAAACTGTGTCAGAAAAAAATAATCTTAATTATGTCAGATAACACTTAAGCAAAACATGGTCAGGTCGAAGTGTCTGAATAATTTTTATCAATTTTACTGTTAGTCCACTGTATGAAGAATTTTTGGGTATAATATGTCACAGTTTACTTTATTTTGCTATCCTCACTTACATAAATTAACTATAGTGTCCTGCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53059 True 273 lncRNA 0.27 1 9988981 9989253

Neighbor

gene id symbol gene type direction distance location
CI01000006_09918611_09921465 MZT2B coding upstream 67188 9918611 ~ 9921793 (+)
CI01000006_09910027_09913958 NA coding upstream 74877 9909370 ~ 9914104 (+)
CI01000006_09891107_09897750 NA coding upstream 91218 9891107 ~ 9897763 (+)
CI01000006_09884959_09889794 NA coding upstream 98692 9884439 ~ 9890289 (+)
CI01000006_09836923_09844045 NA coding upstream 144633 9836923 ~ 9846207 (+)
CI01000006_09998680_10008491 LHX5 coding downstream 9427 9998680 ~ 10009048 (+)
CI01000006_10177090_10192651 NA coding downstream 187837 10177090 ~ 10193519 (+)
CI01000006_10363884_10364804 NA coding downstream 374543 10363796 ~ 10365571 (+)
CI01000006_10518326_10566504 SFSWAP coding downstream 529073 10518326 ~ 10566504 (+)
CI01000006_10574971_10578629 NA coding downstream 585355 10574608 ~ 10578964 (+)
G46662 NA non-coding upstream 1848 9986914 ~ 9987133 (+)
G46569 NA non-coding upstream 131886 9856747 ~ 9857095 (+)
G46566 NA non-coding upstream 137147 9851629 ~ 9851834 (+)
G46565 NA non-coding upstream 137523 9851135 ~ 9851458 (+)
G46671 NA non-coding downstream 4490 9993743 ~ 9994022 (+)
G46677 NA non-coding downstream 23637 10012890 ~ 10013116 (+)
G46680 NA non-coding downstream 27097 10016350 ~ 10017401 (+)
G46681 NA non-coding downstream 28171 10017424 ~ 10018083 (+)
G46690 NA non-coding downstream 42558 10031811 ~ 10042271 (+)
G45416 NA other upstream 1154284 8818814 ~ 8834697 (+)
G45355 NA other upstream 1776593 8209555 ~ 8212388 (+)
CI01000006_08198328_08199463 NA other upstream 1788836 8197881 ~ 8200145 (+)
G45336 NA other upstream 1967030 8019342 ~ 8021951 (+)
G45265 NA other upstream 2068626 7883867 ~ 7920355 (+)
G46652 NA other downstream 167326 10156579 ~ 10159251 (+)
G47145 NA other downstream 496105 10485358 ~ 10511806 (+)
G47159 NA other downstream 1426976 11416229 ~ 11521703 (+)
G47318 NA other downstream 1635014 11624267 ~ 11638252 (+)
G48094 NA other downstream 2288367 12277620 ~ 12279541 (+)

Expression


Co-expression Network