CI01000006_10828974_10834485


Basic Information

Item Value
gene id CI01000006_10828974_10834485
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 10828839 ~ 10834540 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_10828974_10834485.mRNA
AGATATATTCGATGTGGATCTGTTTAGTTGTCACACCAGTCACAGCTTTGGAAAAAGAGGAGAGAGTGAAAAGCGATCAGCAGACCAAAATATTCATATTTTTACTTGGATTTGCTGCATTATATCTGGTCCAGTATGTCTTGCGTTTCTGAAAGCTCACATCTTAACAAGTTCTTGCGGCAGAGATACCTCAGTCTTCCCCAGGGAGACTTCTGTCAAGTCACTTATGTCTGGATTGATGGTTGTGGTGTGGACCTGTTTAGCAAGACTCGAACCATGGATTATGAGCCAAAAATCACAGCTGATATACCAGAATGGGATTTCAGTCAGCAAGGATCCAGTGCTGAGATGCTACTGGCTCCCGTCTGCATGTTCAGGGACCCCTTCCTTTTGGACCCTAACAAACTAATTCTTTGTGAGGTGCTCAAGCACAACCGGGAACCTGCAGAATCGAATCATCGTAACAGCTGTAACAAGGTCATGGAGAAGGTCAAAGATCTCCACCCGTGGTTTGGTATGGAGCAGGAATATACTCTCCTGGGAGTGGATGGACACCCTTATGGCTGGCCCAGACTTGGCTTCCCCAAACCACAAGGTATGTATAACTGCAGTGTTGGTGCTGACAGAGCCTTTGGCAGAGACATTATGGAGTGTCACTATAAAGCTTGTCTGTATGCTGGCATCAAAATCAGTGGCACTAACGCAGAGACCATGCCCTCTCAGTGGGAGTTCCAGGTGGGTCCATGTGAAGGGATTGAGATGGGAGATCATCTGTGGATGGCACGTTTCCTGCTACACAGGGTGTGTGAAGATTTCGGAGTGGTGGCCACCCTGGATCCAAAACCCATGACAGGAGACTGGAATGGAGCCGGTTGCCACATCAATGTGAGCACAGTGCAAACAAGAGAAGAAGGAGGAATTGAGCACATTGAGAAAGCCATCGAGAAACTGAGAAAGCGTCATGCAGAGCATATTCGAGTCTACGACCCAAGTGGTGGCGAGAATAACAAGCAGCGCCTTACAGGTATTCGGGCGTTCTCCAGCATCCATGATTTCTCAGCAGGTGTTGCTAACCGCAGGGCGAGTGTCCGTATTCCCCTACGGGTGGCTCAGAAAAAATGTGGTTATTTTGAGGACCGCCGTCCTGCCGCCAACTGTGACCCATATGTTGTGACCTGCGCAATGGCCCGCACATGTATGCTGGAAGAGGAGGAAGAATTTAAATGGAATTTTGGAAACAAAAATAATGGTTGTTTAATGTTAGAATGAATACTCATCTAATATTGCATATACTTATCATATTTCTTTCAATTTAAGAATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_10828974_10834485.mRNA True 1324 mRNA 0.46 6 10828839 10834540

Neighbor

gene id symbol gene type direction distance location
CI01000006_10807071_10810100 GLULC coding upstream 18638 10806082 ~ 10810201 (+)
CI01000006_10790977_10797880 NA coding upstream 30959 10790977 ~ 10797880 (+)
CI01000006_10787582_10790960 NA coding upstream 37879 10787582 ~ 10790960 (+)
CI01000006_10783751_10785116 PHPT1 coding upstream 43450 10783751 ~ 10785389 (+)
CI01000006_10775003_10781543 NA coding upstream 47182 10775003 ~ 10781657 (+)
CI01000006_10837154_10838610 NA coding downstream 2032 10836572 ~ 10839283 (+)
CI01000006_10856614_10870840 ARRDC1B, ARRDC1 coding downstream 21749 10856289 ~ 10871282 (+)
CI01000006_10901059_10906327 EHMT1, EHMT1B coding downstream 66519 10901059 ~ 10906567 (+)
CI01000006_10911878_10918372 NA coding downstream 77036 10911576 ~ 10918979 (+)
CI01000006_10921053_11064211 NA coding downstream 86513 10921053 ~ 11064211 (+)
G47252 NA non-coding upstream 2906 10825660 ~ 10825933 (+)
G47175 NA non-coding upstream 23786 10801586 ~ 10805053 (+)
G47213 NA non-coding upstream 156247 10664966 ~ 10672592 (+)
G47220 NA non-coding upstream 212821 10615325 ~ 10616018 (+)
G47218 NA non-coding upstream 261540 10566654 ~ 10567299 (+)
G47194 NA non-coding downstream 270121 11104661 ~ 11185170 (+)
G47184 NA non-coding downstream 452946 11287486 ~ 11290495 (+)
G47164 NA non-coding downstream 479983 11314523 ~ 11321670 (+)
G47163 NA non-coding downstream 552663 11387203 ~ 11392950 (+)
G47298 NA non-coding downstream 580216 11414756 ~ 11415179 (+)
G47145 NA other upstream 317033 10485358 ~ 10511806 (+)
G46652 NA other upstream 669588 10156579 ~ 10159251 (+)
G45416 NA other upstream 1994142 8818814 ~ 8834697 (+)
G45355 NA other upstream 2616451 8209555 ~ 8212388 (+)
CI01000006_08198328_08199463 NA other upstream 2628694 8197881 ~ 8200145 (+)
G47159 NA other downstream 581689 11416229 ~ 11521703 (+)
G47318 NA other downstream 789727 11624267 ~ 11638252 (+)
G48094 NA other downstream 1443080 12277620 ~ 12279541 (+)
G48081 NA other downstream 1542466 12377006 ~ 12384827 (+)

Expression


Co-expression Network