G47194


Basic Information

Item Value
gene id G47194
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 11104661 ~ 11185170 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU53686
TATATATATATATATATATATATATATAATTTTTTTTTTTTTTTTTTTTTTACAGATTTGAGCTGTTGATATTAACATGTTAGCATATGGAAAAATGCATTATTATTATTTTTATTTATTTTTGTTAAATCACAAATAACACACACACAACTAACACACAAATTTCATCACTTTCAAAATCTGTGAATAATCGTGATTAAATATTTTAATGGACGGACAGCAGCACAACCTTACAGACACACAGTCCCAAAAATGCAGACCGCTTGTATTTTGACCATTATTGAGCGAGTTTCTTACACACAAGTAGAAACCTTGGATAAGAGATTCCTGCCTATTCTTCCAACGAAAGAAAAACAAGATAATGAGAGAATAGAGGAAGGGAGGGAGAGCCTTTTCTCCATCCCTGCATTCTCGTATTCACTGGTTTTTCTTAATTAAATCGAATTTAAGGCTGCATATCATCGCTATTTCCTTTCTCAGCCCCTCTGCTAATTGTCTCTGACTGAGTAGGTGGCACAAATGTTTTGGCCCCTGTTCACATGATCTCTTGTTCATTACATGGGCTTAGAGCAGGTGACTGACTGTCCGTTGTATTCTTCATCTTGATTTAGCCCCACCATAAAACAGAGAATATACACTGCCTTTCTCTGACAGACCTCATCAATTTGAAGCAGGGCAGGATTGATGCTCGGTCATTACACACTGTTGGGGACCTGTTGATATATGGCTGACTGACTGTGGATCATTGGTCCACATTTCTGTGATTTCAAGACCTCCCTCTCTCAGCACGATATCTTTGTGATATACTGATCCCAGATCTGTCGTTTTTGTGTTTGTGAAATAAATCACATGCCTGTAGAGTCATGGTTTTGAGGGTCTGGTTTTGCGTATTTTATTAGTATGTGTATGTCAAATGGATTTGACCTTTTTTAATGAAAGTTGGAAGCTGCAGAATTTCTGATTTGTATTTGCATTCATTATGAGAATTCTGGAATATTGTAGAATGTGAAAGCACAGTGCAGTAAAATTATAGTTATTCACCTGCTAAAATACTTTCTAGACATTTTATGGCTTCTAAGCCATTTATGCTTTTGAAATTACTACACATATAAAGCAATTTTAGATGAATGAACCTCTCACTCACGTACTCTTGTTCTCTAGTTCTTTCTTATTCAGTCATTCACATGCATACACAAGCATTGAATTATTCTGTGAAGGGAAAGTGGCGTGGCAGTCTCTCTTCCATGATGCACAGAACTGTGACAATTATTTATTTTCAGACTAACACAGTGAGAAACATACAGCATAAAATCCTCTACAAACCACACCAGGAAATGAGTTTGAGATTTAGCCTGGTTACACAATCCTTGTATAATGTAGATTGAAATAATCGGTTGTTCTTGACGACAGGATTTTACAGATCCCAAGACAGTCCTGATACAAAACAGGAGCGTATTGAGAATTTACACCTATTTCCCTTACTAAGGTATTGGACCTGGATCACAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53686 True 1508 lncRNA 0.40 2 11104661 11185170

Neighbor

gene id symbol gene type direction distance location
CI01000006_11069210_11101466 NA coding upstream 3172 11068275 ~ 11101489 (+)
CI01000006_10921053_11064211 NA coding upstream 40450 10921053 ~ 11064211 (+)
CI01000006_10911878_10918372 NA coding upstream 185682 10911576 ~ 10918979 (+)
CI01000006_10901059_10906327 EHMT1, EHMT1B coding upstream 198094 10901059 ~ 10906567 (+)
CI01000006_10856614_10870840 ARRDC1B, ARRDC1 coding upstream 233379 10856289 ~ 10871282 (+)
CI01000006_11298514_11313005 NA coding downstream 113202 11298372 ~ 11313385 (+)
CI01000006_11362605_11384441 NA coding downstream 177435 11362605 ~ 11385087 (+)
CI01000006_11395393_11412606 NA coding downstream 209953 11395123 ~ 11412606 (+)
CI01000006_11429439_11432136 NA coding downstream 243604 11428774 ~ 11432797 (+)
CI01000006_11436920_11440304 NA coding downstream 251750 11436920 ~ 11440304 (+)
G47252 NA non-coding upstream 278728 10825660 ~ 10825933 (+)
G47175 NA non-coding upstream 299608 10801586 ~ 10805053 (+)
G47213 NA non-coding upstream 432069 10664966 ~ 10672592 (+)
G47220 NA non-coding upstream 488643 10615325 ~ 10616018 (+)
G47218 NA non-coding upstream 537362 10566654 ~ 10567299 (+)
G47184 NA non-coding downstream 102316 11287486 ~ 11290495 (+)
G47164 NA non-coding downstream 129353 11314523 ~ 11321670 (+)
G47163 NA non-coding downstream 202033 11387203 ~ 11392950 (+)
G47298 NA non-coding downstream 229586 11414756 ~ 11415179 (+)
G47299 NA non-coding downstream 230268 11415438 ~ 11415704 (+)
G47145 NA other upstream 592855 10485358 ~ 10511806 (+)
G46652 NA other upstream 945410 10156579 ~ 10159251 (+)
G45416 NA other upstream 2269964 8818814 ~ 8834697 (+)
G45355 NA other upstream 2892273 8209555 ~ 8212388 (+)
CI01000006_08198328_08199463 NA other upstream 2904516 8197881 ~ 8200145 (+)
G47159 NA other downstream 231059 11416229 ~ 11521703 (+)
G47318 NA other downstream 439097 11624267 ~ 11638252 (+)
G48094 NA other downstream 1092450 12277620 ~ 12279541 (+)
G48081 NA other downstream 1191836 12377006 ~ 12384827 (+)

Expression


Co-expression Network