CI01000006_11429439_11432136


Basic Information

Item Value
gene id CI01000006_11429439_11432136
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 11428774 ~ 11432797 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_11429439_11432136.mRNA
ATATAAAATCACTTCTAGTTTATTAATAGGTTTTCCAAAGTGTGTGTTAGAACTAGGGTTGGAAAATTTCCAACGGGGATTAACAAGGAATATATAGGAATTAACGGTAATAAAATGGAAATTTGCAAAATTGCAGGTTAGTCTATAACAGGGAACTTAAATGTCTTAAATGTATTTCTGATTATGACCAAACAGAATGTTTATATTATGTTTGTATATGATACAGTTTGTATAAATTACCCCAAATTTCCAATTAATTCCCATAAATTCTCGTTAAGTTTTTGAATATTTACAAAATTCCCTAGCTTAATTTCCCATGGAAAGTTTCTGGAAATTTACCAGAAATTTTCCACCCCTTTGCAACCCTAATTAGAACATAGATGAACATATATTCTATGTACATTCCTGCTGTGGCTTATGTTAGCATTTGCCTTGACAGGGCTCTTCTACCCTTTTATAACAGCTCTTTTTTTTTTTTTTTTTGTTGCCTGGAAACACATCGTCCTCGAGGAGGCCTGTGTATATTAAATTGTGACTGTAAAAGCAAAGAAAAGCTTTCAGAATCTAGTTATGTGGACATGAACAAATTACACAAGTTTGTCTTATAAGATACACACCATTAGTTGAGTTTCACAGTCCAGCTGAGCTCCCGTCCTCCATTAAGAATGAGCCGTTCAGAACAGAGAGTGGATGATGGTTTGATGATGCTTCATGCTCATTTAAATTCTTCCGGATGTGTCATTAGGTTGATGCTCAGCGCAAACAAGTGCCCCGATCACATAGACTGTGCCAGGATGCGGCGGCACTTATCCAAATCTGGATCCTGCCACTGTGGCCCCTGCCTTACCCCATTGGAGGAAGATGAATTGGGACTTTGTGTTGATCACAGGAGACACAATCCCCAGCACCACCTCCAAGACCTTCTTTCTACCTCACCTTCTCTCTTTTTCATACTCCGCAGTATCTTTCCTGTAATGAGTGATTCAGCTCTGCAAACACAGGCCTGGCTCACTGATGAAGAGTCTGATAAAGGGCTGAAGAGTACAGCTGACTACTTTCATTTTGAGCATTTCATTTGTGTAGACGGAGCCTGGCTTTCTGTTACTAAGAATATCTTCAAAAATAAGAGCATATGAATGTGTTTTATTATAGGATAGGATATGTTATCTTGAATTTTAGAGCAGTTTTTATACCTTTACCTTTTGAAATGCTTTCCAGAAAAGTCTTAAAGATCTAAAGAGCACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_11429439_11432136.mRNA False 1246 mRNA 0.37 3 11428774 11432246

Neighbor

gene id symbol gene type direction distance location
CI01000006_11395393_11412606 NA coding upstream 16168 11395123 ~ 11412606 (+)
CI01000006_11362605_11384441 NA coding upstream 43687 11362605 ~ 11385087 (+)
CI01000006_11298514_11313005 NA coding upstream 115389 11298372 ~ 11313385 (+)
CI01000006_11178091_11284993 DFNB31, DFNB31A, WHRN coding upstream 143743 11177136 ~ 11285031 (+)
CI01000006_11143743_11157316 MAN1B1A coding upstream 270187 11143743 ~ 11158587 (+)
CI01000006_11436920_11440304 NA coding downstream 4674 11436920 ~ 11440304 (+)
CI01000006_11452997_11455817 POU5F3 coding downstream 19995 11452241 ~ 11456562 (+)
CI01000006_11469982_11473164 CLIC4, CLIC3 coding downstream 36883 11469129 ~ 11473627 (+)
CI01000006_11476139_11503761 PNPLA7 coding downstream 43893 11476139 ~ 11504598 (+)
CI01000006_11546432_11575289 NSMFA coding downstream 114186 11546432 ~ 11575476 (+)
G47299 NA non-coding upstream 13070 11415438 ~ 11415704 (+)
G47298 NA non-coding upstream 13595 11414756 ~ 11415179 (+)
G47163 NA non-coding upstream 35824 11387203 ~ 11392950 (+)
G47164 NA non-coding upstream 107104 11314523 ~ 11321670 (+)
G47184 NA non-coding upstream 138279 11287486 ~ 11290495 (+)
G47315 NA non-coding downstream 94542 11526788 ~ 11527016 (+)
G47362 NA non-coding downstream 236128 11668374 ~ 11668589 (+)
G47368 NA non-coding downstream 252389 11684635 ~ 11684975 (+)
G47333 NA non-coding downstream 282440 11714686 ~ 11720080 (+)
G47145 NA other upstream 916968 10485358 ~ 10511806 (+)
G46652 NA other upstream 1269523 10156579 ~ 10159251 (+)
G45416 NA other upstream 2594077 8818814 ~ 8834697 (+)
G45355 NA other upstream 3216386 8209555 ~ 8212388 (+)
CI01000006_08198328_08199463 NA other upstream 3228629 8197881 ~ 8200145 (+)
G47318 NA other downstream 192021 11624267 ~ 11638252 (+)
G48094 NA other downstream 845374 12277620 ~ 12279541 (+)
G48081 NA other downstream 944760 12377006 ~ 12384827 (+)

Expression


Co-expression Network