Gene
RNA
| Item | Value |
|---|---|
| gene id | G47315 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 11526788 ~ 11527016 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU53816 | True | 229 | lncRNA | 0.35 | 1 | 11526788 | 11527016 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_11476139_11503761 | PNPLA7 | coding | upstream | 22190 | 11476139 ~ 11504598 (+) |
| CI01000006_11469982_11473164 | CLIC4, CLIC3 | coding | upstream | 53161 | 11469129 ~ 11473627 (+) |
| CI01000006_11452997_11455817 | POU5F3 | coding | upstream | 70226 | 11452241 ~ 11456562 (+) |
| CI01000006_11436920_11440304 | NA | coding | upstream | 86484 | 11436920 ~ 11440304 (+) |
| CI01000006_11429439_11432136 | NA | coding | upstream | 94542 | 11428774 ~ 11432797 (+) |
| CI01000006_11546432_11575289 | NSMFA | coding | downstream | 19416 | 11546432 ~ 11575476 (+) |
| CI01000006_11704767_11714559 | WDR34 | coding | downstream | 177751 | 11704767 ~ 11714661 (+) |
| CI01000006_11751944_11752854 | NA | coding | downstream | 223838 | 11750854 ~ 11753218 (+) |
| CI01000006_11784520_11803562 | NA | coding | downstream | 255015 | 11782031 ~ 11803850 (+) |
| CI01000006_11888383_11923287 | NA | coding | downstream | 361176 | 11888192 ~ 11924390 (+) |
| G47299 | NA | non-coding | upstream | 111084 | 11415438 ~ 11415704 (+) |
| G47298 | NA | non-coding | upstream | 111609 | 11414756 ~ 11415179 (+) |
| G47163 | NA | non-coding | upstream | 133838 | 11387203 ~ 11392950 (+) |
| G47362 | NA | non-coding | downstream | 141358 | 11668374 ~ 11668589 (+) |
| G47368 | NA | non-coding | downstream | 157619 | 11684635 ~ 11684975 (+) |
| G47333 | NA | non-coding | downstream | 187670 | 11714686 ~ 11720080 (+) |
| G47390 | NA | non-coding | downstream | 263195 | 11790211 ~ 11790433 (+) |
| G47912 | NA | non-coding | downstream | 307216 | 11834232 ~ 11834488 (+) |
| G47159 | NA | other | upstream | 5085 | 11416229 ~ 11521703 (+) |
| G47145 | NA | other | upstream | 1014982 | 10485358 ~ 10511806 (+) |
| G46652 | NA | other | upstream | 1367537 | 10156579 ~ 10159251 (+) |
| G45416 | NA | other | upstream | 2692091 | 8818814 ~ 8834697 (+) |
| G45355 | NA | other | upstream | 3314400 | 8209555 ~ 8212388 (+) |
| G47318 | NA | other | downstream | 97251 | 11624267 ~ 11638252 (+) |
| G48094 | NA | other | downstream | 750604 | 12277620 ~ 12279541 (+) |
| G48081 | NA | other | downstream | 849990 | 12377006 ~ 12384827 (+) |
