G41302


Basic Information

Item Value
gene id G41302
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 2085635 ~ 2130958 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU46901
ACAGTCAGTTATGTTTTAAAGGTGCAATATGTAAGAATTTTGCAGTAAAATATCCAAAAACCACTAGGCCAGTGTTATATATTTTGTTCACTTGAGTACTAACAATATCCCAAATGTTTCCAACTATTTGTAATTCGTGAGAAAATTGCAATTTTAACCAAGGCTCCGGGACGTGTGAGGAGTCGCCTGTCAATTGCGTCATACCCGCGTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46901 True 213 lncRNA 0.31 2 2085635 2130958

Neighbor

gene id symbol gene type direction distance location
CI01000006_02043266_02045032 NA coding upstream 40513 2043266 ~ 2045122 (+)
CI01000006_02034527_02040359 FAM53C coding upstream 44367 2034527 ~ 2041268 (+)
CI01000006_02023656_02025259 SLBP2 coding upstream 59891 2023656 ~ 2025744 (+)
CI01000006_01965496_01966308 NHP2, NOLA2 coding upstream 119281 1965496 ~ 1966354 (+)
CI01000006_01964013_01964347 GRPEL2 coding upstream 121178 1964013 ~ 1964457 (+)
CI01000006_02134157_02143363 NA coding downstream 3199 2134157 ~ 2143760 (+)
CI01000006_02157297_02159922 FABP6 coding downstream 26339 2157297 ~ 2159968 (+)
CI01000006_02181904_02185719 NA coding downstream 49952 2180910 ~ 2186292 (+)
CI01000006_02241091_02259573 NA coding downstream 110133 2241091 ~ 2259639 (+)
CI01000006_02274089_02276641 NA coding downstream 142933 2273891 ~ 2276681 (+)
G41281 NA non-coding upstream 59070 2026350 ~ 2026565 (+)
G41280 NA non-coding upstream 59392 2025932 ~ 2026243 (+)
G41246 NA non-coding upstream 62759 2016130 ~ 2022876 (+)
G41276 NA non-coding upstream 69989 2013266 ~ 2015646 (+)
G41242 NA non-coding upstream 161691 1918932 ~ 1923944 (+)
G41328 NA non-coding downstream 1035 2131993 ~ 2132347 (+)
G41347 NA non-coding downstream 31598 2162556 ~ 2163031 (+)
G41360 NA non-coding downstream 68107 2199065 ~ 2225977 (+)
G41344 NA non-coding downstream 136371 2267329 ~ 2269264 (+)
G41387 NA non-coding downstream 142088 2273046 ~ 2273269 (+)
G41170 NA other upstream 389814 1692065 ~ 1695821 (+)
G40768 NA other upstream 1592609 488407 ~ 493026 (+)
G40767 NA other upstream 1602300 360009 ~ 484185 (+)
G40772 NA other upstream 1606441 475465 ~ 479194 (+)
G41424 NA other downstream 514704 2645662 ~ 2660570 (+)
G41591 NA other downstream 705209 2836167 ~ 2839421 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other downstream 1598272 3734554 ~ 3736035 (+)
G41996 NA other downstream 2986248 5117206 ~ 5124149 (+)
G43896 NA other downstream 3639131 5770089 ~ 5771775 (+)

Expression


Co-expression Network