Gene
RNA
| Item | Value |
|---|---|
| gene id | G43335 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 3529329 ~ 3531439 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU49188 | False | 2053 | lncRNA | 0.31 | 1 | 3529329 | 3531381 |
| TU49191 | False | 2111 | lncRNA | 0.39 | 1 | 3529329 | 3531439 |
| TU49189 | True | 1926 | lncRNA | 0.41 | 1 | 3529456 | 3531381 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_03451569_03452222 | BADA | coding | downstream | 75863 | 3451386 ~ 3453466 (-) |
| CI01000006_03379749_03383412 | NA | coding | downstream | 145450 | 3379725 ~ 3383879 (-) |
| CI01000006_03370040_03371517 | NA | coding | downstream | 157653 | 3368892 ~ 3371676 (-) |
| CI01000006_03366101_03366985 | NA | coding | downstream | 162344 | 3366063 ~ 3366985 (-) |
| CI01000006_03357824_03365324 | SART1 | coding | downstream | 164005 | 3357798 ~ 3365324 (-) |
| CI01000006_03555987_03560997 | FKBP2 | coding | upstream | 24202 | 3555641 ~ 3560997 (-) |
| CI01000006_03571836_03607035 | PC | coding | upstream | 39969 | 3571408 ~ 3607147 (-) |
| CI01000006_03631937_03713404 | PC, PCX, PCXB, PCXA | coding | upstream | 100498 | 3631937 ~ 3713404 (-) |
| CI01000006_03721474_03728658 | NA | coding | upstream | 188548 | 3719987 ~ 3729549 (-) |
| CI01000006_03737857_03742809 | GNG4, GNG2, GNG3 | coding | upstream | 206311 | 3736572 ~ 3742820 (-) |
| G43334 | NA | non-coding | downstream | 157 | 3528893 ~ 3529172 (-) |
| G43301 | NA | non-coding | downstream | 121854 | 3403439 ~ 3407475 (-) |
| G43282 | NA | non-coding | downstream | 331107 | 3197876 ~ 3198222 (-) |
| G43274 | NA | non-coding | downstream | 367029 | 3162070 ~ 3162300 (-) |
| G43148 | NA | non-coding | downstream | 367562 | 3140950 ~ 3161767 (-) |
| G43336 | NA | non-coding | upstream | 2089 | 3533528 ~ 3534121 (-) |
| G43337 | NA | non-coding | upstream | 3532 | 3534971 ~ 3535333 (-) |
| G43338 | NA | non-coding | upstream | 4609 | 3536048 ~ 3536326 (-) |
| G43339 | NA | non-coding | upstream | 5516 | 3536955 ~ 3537216 (-) |
| G43102 | NA | other | downstream | 595345 | 2908451 ~ 2933984 (-) |
| CI01000006_02624725_02626124 | COX8A | other | downstream | 903143 | 2624436 ~ 2626776 (-) |
| G42934 | NA | other | downstream | 947123 | 2523776 ~ 2582206 (-) |
| CI01000006_02285649_02294759 | NA | other | downstream | 1234331 | 2284994 ~ 2296494 (-) |
| G42667 | NA | other | downstream | 1638573 | 1888988 ~ 1890756 (-) |
| G43549 | NA | other | upstream | 821071 | 4352510 ~ 4355428 (-) |
| CI01000006_04560607_04560993 | NA | other | upstream | 1028070 | 4559509 ~ 4562068 (-) |
| CI01000006_06974359_06976736 | NA | other | upstream | 3441785 | 6973224 ~ 6976872 (-) |
| CI01000006_07500281_07507754 | NA | other | upstream | 3971706 | 7500246 ~ 7507976 (-) |
| CI01000006_10453630_10483241 | NA | other | upstream | 6951417 | 10453613 ~ 10484006 (-) |
