Gene
RNA
| Item | Value |
|---|---|
| gene id | G43282 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 3197876 ~ 3198222 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU49133 | True | 347 | lncRNA | 0.39 | 1 | 3197876 | 3198222 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_03043665_03066360 | NA | coding | downstream | 130717 | 3043238 ~ 3067159 (-) |
| CI01000006_03018948_03029493 | NA | coding | downstream | 166715 | 3018399 ~ 3031161 (-) |
| CI01000006_02766733_02767600 | NA | coding | downstream | 429138 | 2766365 ~ 2768738 (-) |
| CI01000006_02720061_02749853 | NA | coding | downstream | 448002 | 2719967 ~ 2749874 (-) |
| CI01000006_02689895_02705309 | NA | coding | downstream | 489309 | 2689655 ~ 2708567 (-) |
| CI01000006_03205005_03228985 | PACS1, PACS1A | coding | upstream | 6774 | 3204996 ~ 3229508 (-) |
| CI01000006_03244690_03253311 | BBS1 | coding | upstream | 46351 | 3244573 ~ 3253311 (-) |
| CI01000006_03256291_03262601 | NA | coding | upstream | 57921 | 3256143 ~ 3262601 (-) |
| CI01000006_03270739_03288631 | NA | coding | upstream | 72143 | 3270365 ~ 3289514 (-) |
| CI01000006_03300379_03312388 | ACTN3, ACTN3A, ACTN3B, ACTN3.L | coding | upstream | 101824 | 3300046 ~ 3312388 (-) |
| G43274 | NA | non-coding | downstream | 35576 | 3162070 ~ 3162300 (-) |
| G43148 | NA | non-coding | downstream | 36109 | 3140950 ~ 3161767 (-) |
| G43264 | NA | non-coding | downstream | 79783 | 3117424 ~ 3118093 (-) |
| G43262 | NA | non-coding | downstream | 81690 | 3112511 ~ 3116186 (-) |
| G43092 | NA | non-coding | downstream | 217262 | 2883825 ~ 2980614 (-) |
| G43301 | NA | non-coding | upstream | 205217 | 3403439 ~ 3407475 (-) |
| G43334 | NA | non-coding | upstream | 330671 | 3528893 ~ 3529172 (-) |
| G43335 | NA | non-coding | upstream | 331107 | 3529329 ~ 3531439 (-) |
| G43336 | NA | non-coding | upstream | 335306 | 3533528 ~ 3534121 (-) |
| G43337 | NA | non-coding | upstream | 336749 | 3534971 ~ 3535333 (-) |
| G43102 | NA | other | downstream | 263892 | 2908451 ~ 2933984 (-) |
| CI01000006_02624725_02626124 | COX8A | other | downstream | 571690 | 2624436 ~ 2626776 (-) |
| G42934 | NA | other | downstream | 615670 | 2523776 ~ 2582206 (-) |
| CI01000006_02285649_02294759 | NA | other | downstream | 902878 | 2284994 ~ 2296494 (-) |
| G42667 | NA | other | downstream | 1307120 | 1888988 ~ 1890756 (-) |
| G43549 | NA | other | upstream | 1154288 | 4352510 ~ 4355428 (-) |
| CI01000006_04560607_04560993 | NA | other | upstream | 1361287 | 4559509 ~ 4562068 (-) |
| CI01000006_06974359_06976736 | NA | other | upstream | 3775002 | 6973224 ~ 6976872 (-) |
| CI01000006_07500281_07507754 | NA | other | upstream | 4304923 | 7500246 ~ 7507976 (-) |
| CI01000006_10453630_10483241 | NA | other | upstream | 7284634 | 10453613 ~ 10484006 (-) |
