G91085


Basic Information

Item Value
gene id G91085
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 15330595 ~ 15331220 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU122490
gcttgtaagatcttagtgtctataataaataagtcagaagcgttctttgaccaaaaaatacatttcccacaatgcttgtcgattgtattacccgcaaagttacggcttactgccactacacggcagtgtagtcattgatgtggaaaccctgccggagggaaggtgtaacttcgcgggtggaattgagacatataaatgtttatcccataatgtccagaaaaagagaagttgatgcagacggacggctgtgcttcaaggcgaaagaccggtatgccttttgtgttacgaagagtgttactgaccaaaataaacgctttttaggagagatataagttctgtgtaaatatttataagacaatagctgacaaaatctgttttaatgacgttaataaacatcactgggacagcgctagtcgcagtttcaccgcagcaaagtacgaggacgtgaatcacttatctaaccagcctttactaatttctgccctcaataaccctttcaataacctccaatagcctttaatagtcttcagtagccttcaacagtctaaccttgcagccgtggtgtgtccactaaactccgtagttataaacatcctgaggttagcagcgcgataactgacctgttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122490 True 626 lncRNA 0.42 1 15330595 15331220

Neighbor

gene id symbol gene type direction distance location
LOC103024964 tmem56a,LOC103024964,LOC108428968,LOC107712816,LOC107677262,LOC107657764,LOC107560653 coding upstream 55699 15248801 ~ 15274896 (+)
cnn3 cnn3,cnn3a,LOC108269615,LOC108428967,LOC107739018,LOC107657766 coding upstream 95780 15222823 ~ 15234815 (+)
LOC103022978 LOC108428965 coding upstream 175577 15145358 ~ 15155018 (+)
abcd3 abcd3,LOC107677270,LOC107712812 coding upstream 186290 15130223 ~ 15144305 (+)
LOC103045456 LOC108428960,LOC107657767,LOC107555432,LOC107739029 coding upstream 235632 15076348 ~ 15094963 (+)
LOC103025597 ptbp2,LOC108268572,LOC107739015,LOC107657762,LOC107677274,LOC107712817 coding downstream 137073 15468293 ~ 15482803 (+)
snx7 snx7 coding downstream 482091 15813311 ~ 15840883 (+)
LOC103027205 NA coding downstream 515596 15846816 ~ 15870067 (+)
plppr4 plppr4 coding downstream 639705 15970925 ~ 15996811 (+)
palmd palmd coding downstream 697950 16029170 ~ 16074402 (+)
G91084 NA non-coding upstream 439 15329443 ~ 15330156 (+)
G91083 NA non-coding upstream 1196 15329108 ~ 15329399 (+)
G91080 NA non-coding upstream 41653 15288591 ~ 15288942 (+)
G91075 NA non-coding upstream 91163 15238386 ~ 15239432 (+)
LOC111193336 NA non-coding upstream 105903 15223135 ~ 15224692 (+)
G91086 NA non-coding downstream 4598 15335818 ~ 15336053 (+)
G91088 NA non-coding downstream 33965 15365185 ~ 15365969 (+)
G91110 NA non-coding downstream 374503 15705723 ~ 15792823 (+)
G91137 NA non-coding downstream 629911 15961131 ~ 15961793 (+)
G91139 NA non-coding downstream 635330 15966550 ~ 15967007 (+)
LOC103025288 LOC107578870,LOC108428970,LOC106578494,LOC108273189 other upstream 47540 15276142 ~ 15283055 (+)
alg14 alg14,LOC107739035 other upstream 114087 15160215 ~ 15216508 (+)
LOC103045856 NA other upstream 557228 14662657 ~ 14773367 (+)
LOC103029466 c1ql3,LOC103029466,LOC108428918,LOC107677106,LOC107599742,LOC107555006 other upstream 678313 14645798 ~ 14652282 (+)
eif1b eif1b,zgc:56676,LOC107657782,LOC107599656,LOC105910901,LOC107712803,LOC105027100 other upstream 1055897 14271995 ~ 14274698 (+)
trim71 trim71,LOC107751884,LOC107657583,LOC107601676,LOC107723073,LOC107551222 other downstream 1063994 16395214 ~ 16419380 (+)
rcc1 NA other downstream 2027619 17358839 ~ 17447933 (+)
G91678 NA other downstream 2580681 17911901 ~ 17912443 (+)
G91728 NA other downstream 3016807 18348027 ~ 18361095 (+)
G91748 NA other downstream 3069268 18400488 ~ 18421263 (+)

Expression


Co-expression Network