G91075


Basic Information

Item Value
gene id G91075
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 15238386 ~ 15239432 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU122477
GGGGGAGTGAATTTCCTGGAGCTGACGGGCTGCTGATCACTGTGAGATAGCGGCCCCTTGCTGGCCAAAGCTGGGCCAGATCCAGGACCTGTGGAAATGCCTAAATGCCTGAAGGAAACCTCTTTGTCTCTGGGAGACTGCAGCCCCAATAGGCATTAGCAGAGGAGGATCATAGCAAAGAATCAACTCTGCAACTGCTGGAAAAATACTCCTGCGAGTGATGTGGAGCGGCAGACATTTCATCTCAGCTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122477 True 252 lncRNA 0.53 2 15238386 15239432

Neighbor

gene id symbol gene type direction distance location
cnn3 cnn3,cnn3a,LOC108269615,LOC108428967,LOC107739018,LOC107657766 coding upstream 3571 15222823 ~ 15234815 (+)
LOC103022978 LOC108428965 coding upstream 83368 15145358 ~ 15155018 (+)
abcd3 abcd3,LOC107677270,LOC107712812 coding upstream 94081 15130223 ~ 15144305 (+)
LOC103045456 LOC108428960,LOC107657767,LOC107555432,LOC107739029 coding upstream 143423 15076348 ~ 15094963 (+)
LOC103021625 LOC108258200,LOC107555421,LOC107657742,LOC107739024,LOC108428909,LOC562466,LOC105897216,LOC107590319 coding upstream 162404 15066092 ~ 15075982 (+)
LOC103024964 tmem56a,LOC103024964,LOC108428968,LOC107712816,LOC107677262,LOC107657764,LOC107560653 coding downstream 9369 15248801 ~ 15274896 (+)
LOC103025597 ptbp2,LOC108268572,LOC107739015,LOC107657762,LOC107677274,LOC107712817 coding downstream 228861 15468293 ~ 15482803 (+)
snx7 snx7 coding downstream 573879 15813311 ~ 15840883 (+)
LOC103027205 NA coding downstream 607384 15846816 ~ 15870067 (+)
plppr4 plppr4 coding downstream 731493 15970925 ~ 15996811 (+)
LOC111193336 NA non-coding upstream 13694 15223135 ~ 15224692 (+)
G91036 NA non-coding upstream 114893 15121858 ~ 15123493 (+)
G91009 NA non-coding upstream 135255 15102372 ~ 15103131 (+)
G90996 NA non-coding upstream 218982 15018886 ~ 15019404 (+)
G90994 NA non-coding upstream 230415 15007020 ~ 15007971 (+)
G91080 NA non-coding downstream 49159 15288591 ~ 15288942 (+)
G91083 NA non-coding downstream 89676 15329108 ~ 15329399 (+)
G91084 NA non-coding downstream 90011 15329443 ~ 15330156 (+)
G91085 NA non-coding downstream 91163 15330595 ~ 15331220 (+)
G91086 NA non-coding downstream 96386 15335818 ~ 15336053 (+)
alg14 alg14,LOC107739035 other upstream 21878 15160215 ~ 15216508 (+)
LOC103045856 NA other upstream 465019 14662657 ~ 14773367 (+)
LOC103029466 c1ql3,LOC103029466,LOC108428918,LOC107677106,LOC107599742,LOC107555006 other upstream 586104 14645798 ~ 14652282 (+)
eif1b eif1b,zgc:56676,LOC107657782,LOC107599656,LOC105910901,LOC107712803,LOC105027100 other upstream 963688 14271995 ~ 14274698 (+)
npy npy other upstream 2290136 12944786 ~ 12948250 (+)
LOC103025288 LOC107578870,LOC108428970,LOC106578494,LOC108273189 other downstream 36710 15276142 ~ 15283055 (+)
trim71 trim71,LOC107751884,LOC107657583,LOC107601676,LOC107723073,LOC107551222 other downstream 1155782 16395214 ~ 16419380 (+)
rcc1 NA other downstream 2119407 17358839 ~ 17447933 (+)
G91678 NA other downstream 2672469 17911901 ~ 17912443 (+)
G91728 NA other downstream 3108595 18348027 ~ 18361095 (+)

Expression


Co-expression Network