npy (npy)


Basic Information

Item Value
gene id npy
gene name npy
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 12944786 ~ 12948250 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU121747
AATCACTGAGGCTGCACTGTCAAACTCTCAGCATCAATCTCAGCCAGCACTGACAGATATGCTGACTCATGTGATGATGTCCCTTGGGACTGCACTGCTGATGTTAACCGCAAGCAGTGCATACCCACTGAAACCAGCCAGTCCTGGTGAGAATGTACCTGCAGAGGAGCTGGCTAAGTATTATTCTGACCTGCGACACTACATCAATCTCATCACACGACACAGGTATGGGAAAAGAGATGCCCCCCATAATCTGTTCTCTGACCTTTTGCtgacagaaaacacagagagtATCCCACAGCTGTGGTACGGAGATACTGCTGACGAAAGCAGAAACAGaTATGATGACCTAAGGGATCTAAAGGATCTAAAGATGTGGTGATATGAGATGTGCCTCTCCTTCACGAACACACAGACTGAAGACCCCAAAATCATGGCAGCAAAAAATAACTTTCAGCATTCCTGTTGATCATTAAAggattatttacattttgttcaCAAATTTCAGTCTTTTTTATAAGTCGGTGTATGATATCCTATAAATAAATGCCTTTTTGACCTTAAGcatatttttgcacattttgcattgagtgtatagatttttttaggcattttattttatttgtataaattattatttgtttttgaccaatcattcaacatttcttctaaaattaaatatattaataaggCATGTGTCACCTCTCATTATACTAATTCATATATTCACTTTGATTCATTGCATTTTGCAACAATATCAATGTTTATGTCTAGTAATGATTGAGAATTAGCTCTGAATCACCAACACCCCTCCAACtcatactacatactacatgGCCTATTCTATAATTGCAGGTACATTTCATGCATGGAAGAATTTGACTCATAGGCTAAATCTTAACtctaaacatttgtttttgcGATGACTGAGTTCATAGAAGAGTTGACCTTTTCTACCTTTTTGTCACTTAAAACCTTAAAATGAAGTGTGCATGGCATatctaaaaaaacagtttattcaaatgtatttattaaaattaggaGATTTACTAATAATCGTAATAAAGGTTTTGACCAATAATTAAAACTGTTGATCTATCCATAACTTTTTATGCgaaataataaatttaaaagcTTGGCATGTGTCACTGCTTTCCAAAGTTACAAATTTGTGCAattcatgtgttttttgttgtttttgttgcagATTTTATAATGGAATAGTAGTAGAATAGAACAGTAATTTAGggtatacataaaaatacaaaaccatttgatgtattatttttttcatacattgtaaatttacatAGTATTTAGGGGGCTCTagtatttagct
>XM_007233359.3
GTGTATGCAGTATAAAAACTCAGCATGAGCACCAGGTGCCAGAATCACTGAGGCTGCACTGTCAAACTCTCAGCATCAATCTCAGCCAGCACTGACAGATATGCTGACTCATGTGATGATGTCCCTTGGGACTGCACTGCTGATGTTAACCGCAAGCAGTGCATACCCACTGAAACCAGCCAGTCCTGGTGAGAATGTACCTGCAGAGGAGCTGGCTAAGTATTATTCTGACCTGCGACACTACATCAATCTCATCACACGACACAGGTATGGGAAAAGAGATGCCCCCCATAATCTGTTCTCTGACCTTTTGCtgacagaaaacacagagagtATCCCACAGCTGTGGTACGGAGATACTGCTGACGAAAGCAGAAACAGaTATGATGACCTAAGGGATCTAAAGGATCTAAAGATGTGGTGATATGAGATGTGCCTCTCCTTCACGAACACACAGACTGAAGACCCCAAAATCATGGCAGCAAAAAATAACTTTCAGCATTCCTGTTGATCATTAAAggattatttacattttgttcaCAAATTTCAGTCTTTTTTATAAGTCGGTGTATGATATCCTATAAATAAATGCCTTTTTGACCTTAAGcata

Function

symbol description
npy Enables type 2 neuropeptide Y receptor binding activity. Acts upstream of or within negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway; positive regulation of circadian sleep/wake cycle, sleep; and positive regulation of feeding behavior. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in several structures, including brain; digestive system; eye; immune system; and male organism. Human ortholog(s) of this gene implicated in several diseases, including Huntington's disease; alcohol use disorder; artery disease (multiple); epilepsy (multiple); and type 2 diabetes mellitus. Orthologous to human NPY (neuropeptide Y).

NR:

description
PREDICTED: pro-neuropeptide Y

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121747 True 1339 TUCP 0.34 4 12944828 12948250
XM_007233359.3 False 611 mRNA 0.43 4 12944786 12947480

Neighbor

gene id symbol gene type direction distance location
stk31 NA coding upstream 48 12927210 ~ 12944738 (+)
LOC103037789 LOC108436550,LOC108258408,LOC105908885 coding upstream 158606 12762287 ~ 12786180 (+)
ttc24 ttc24 coding upstream 184763 12744236 ~ 12760023 (+)
ankrd34a ankrd34a,LOC107719128,LOC107666885,LOC107714325,LOC107592270 coding upstream 279391 12641421 ~ 12665395 (+)
LOC103036326 txnip,LOC103036326 coding upstream 334739 12607288 ~ 12610047 (+)
mpp6 mpp6,mpp6a,LOC108267518,LOC107749029,LOC107685533,LOC107596657 coding downstream 2367 12950617 ~ 12983779 (+)
LOC103024879 pde11al,LOC108441531,LOC107743218,LOC103364058 coding downstream 219405 13167655 ~ 13192266 (+)
ascc3 ascc3 coding downstream 870841 13819091 ~ 14034911 (+)
sim1 sim1,sim1a,LOC107697271,LOC107661021,LOC103355653,LOC107551726 coding downstream 1088722 14036972 ~ 14056298 (+)
LOC103046158 LOC103046158,LOC108428940,LOC107095448 coding downstream 1162275 14110525 ~ 14119663 (+)
G90489 crtc2,LOC108436548 non-coding upstream 31729 12911538 ~ 12913057 (+)
G90459 NA non-coding upstream 151803 12792512 ~ 12792983 (+)
G90452 iqgap3,LOC106605450,LOC105031059 non-coding upstream 203242 12727365 ~ 12741544 (+)
G90382 NA non-coding upstream 342525 12601502 ~ 12602261 (+)
LOC111193294 NA non-coding upstream 413791 12530040 ~ 12530995 (+)
G90502 NA non-coding downstream 54472 13002722 ~ 13016527 (+)
G90512 NA non-coding downstream 72764 13021014 ~ 13021239 (+)
G90513 NA non-coding downstream 73747 13021997 ~ 13022608 (+)
G90604 NA non-coding downstream 314293 13262543 ~ 13262851 (+)
G90605 NA non-coding downstream 318388 13266638 ~ 13266885 (+)
LOC103044318 mtx1a,LOC108436561,LOC107719130,LOC107592302,LOC107666872,LOC107686169,LOC107592422 other upstream 392014 12532301 ~ 12552772 (+)
G90199 cct3 other upstream 787924 12154897 ~ 12156862 (+)
LOC103025787 LOC103025787,LOC100536175,LOC107587908 other upstream 805924 12135279 ~ 12138862 (+)
LOC111193328 NA other upstream 2037614 10903683 ~ 10907172 (+)
LOC103044517 onecutl,LOC108441924,LOC107732477,LOC108268128,LOC107741751,LOC106580869,LOC107663311,LOC107689849 other upstream 2153658 10780102 ~ 10791128 (+)
eif1b eif1b,zgc:56676,LOC107657782,LOC107599656,LOC105910901,LOC107712803,LOC105027100 other downstream 1323745 14271995 ~ 14274698 (+)
LOC103029466 c1ql3,LOC103029466,LOC108428918,LOC107677106,LOC107599742,LOC107555006 other downstream 1697548 14645798 ~ 14652282 (+)
LOC103045856 NA other downstream 1714407 14662657 ~ 14773367 (+)
alg14 alg14,LOC107739035 other downstream 2211965 15160215 ~ 15216508 (+)
LOC103025288 LOC107578870,LOC108428970,LOC106578494,LOC108273189 other downstream 2327892 15276142 ~ 15283055 (+)

Expression


Co-expression Network