G91185 (LOC108428970,LOC108273189,LOC106578494)


Basic Information

Item Value
gene id G91185
gene name LOC108428970,LOC108273189,LOC106578494
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 15281518 ~ 15282969 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU122638
atatacaaaaGGTTTTTATGATCTGGTCATCAGTAATAAGTTAAATTAACTTGAACATGTCATTCAGTTAAAACCAAATTAAAGTAATTTGGTAAAGAGACACATTAGAGATGATCTGTGGGAGAGATAAATAGCTTTATACCTCGCTTAAAAAGATAAGAAGCAAAAATCGATGTGAATATTTGTTTCTTAAAAGAGCCAACACGGATTTATAATTACCACTGAACCGTTCCAGGAAGCTGCAGCGTAACCGTTTTTTGTAATtctataaaaagacaaaaaagtaccacacaaactggctgttttttaaacaaaaagccAAGATCTTAAAACAGAAATTGCAGTCTTTCCTTACCAACAGTATATTTTAAGGGTCGTAACCTCCAAAAACTTGAGTAAACTGAGCGGCAGTGATATTGATCCCTCATATATGCTCAGTTATGTCTTCCCAACATAATAATTgagcaaataattatttttttgtatgtaggttttgttattacagttttatcttttaaaaattgggataatttaaagaactgcatgcTGTTGAACTACAAATTTGGAATGGAATATTTCCGCATCATAAACGCAAAccatttgaaaaaaaagagttttcaaAGAACATATCCATATACGTGTCTGCTTCAGAAAAATCTCATTACACACAAGTTAAAACAAACTCCCTATGTGCAATGAGcaattttactttactacaatCAGCTTCTTATTTACAACCTTGTAACATGATATGATCACTTCCAGCTCAGAGGGGGTGGCTTAAGATGTCCAGCGCCACCAGGCCACCTTTGCTCTATCCCATACTGCTCCAATAGAGTCCAAAGCTGGACGCACATCCAAGATAGAGAACTGATAAGAGTCTTTGTTGATGTCTCCTTCATAGTAGTCGATCACGTATCGAACTTCTTTTCCACAACGATCCACGATCCAGTCATGCCGGTCAAATGGCAATTCATACCCCATCCAATGACGCATCCTGGCCCTGGGTGAAAATTCCTTTGCTTTACCGCCAAACCTCTTCAAAGATGGACCACACGGACATTCACCAGCATGCAATGCCTCCCACTTCAGAATCTCCTCCCAAGCCTGATCGTTGTTGCGATTGTGGATCTTGAtaatattc

Function

NR:

description
PREDICTED: cytochrome c-type heme lyase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122638 True 1144 lncRNA 0.37 3 15281518 15282969

Neighbor

gene id symbol gene type direction distance location
f3 NA coding downstream 120772 15154698 ~ 15160746 (-)
LOC103021960 LOC108428923 coding downstream 160630 15112593 ~ 15120888 (-)
cpne3 cpne3,LOC107712810,LOC107657769,LOC107739025,LOC107677279 coding downstream 171070 15094967 ~ 15110448 (-)
cnbd1 NA coding downstream 222658 15007236 ~ 15058860 (-)
vim vim,LOC107098299,LOC107732120 coding downstream 760378 14513488 ~ 14521140 (-)
dpyd dpyd,LOC107677268,LOC107590279,LOC106578501 coding upstream 242951 15525920 ~ 15732876 (-)
plppr5 plppr5,LOC107739033,LOC107677304,LOC107712819,LOC107657749 coding upstream 590028 15872997 ~ 15962933 (-)
frrs1 NA coding upstream 791717 16074686 ~ 16092755 (-)
ano10 ano10,LOC107751882,LOC107601655,LOC107657579 coding upstream 972006 16254975 ~ 16292970 (-)
cnot10 cnot10 coding upstream 1140354 16423323 ~ 16435328 (-)
G91184 NA non-coding downstream 1267 15279874 ~ 15280251 (-)
G91183 NA non-coding downstream 2149 15276161 ~ 15279369 (-)
G91178 tmem56a,LOC103024964,LOC108428968,LOC107677262,LOC107578871,LOC107712816 non-coding downstream 6619 15248603 ~ 15274899 (-)
G91179 NA non-coding downstream 10786 15263853 ~ 15270732 (-)
G91176 NA non-coding downstream 45514 15235089 ~ 15236004 (-)
G91189 NA non-coding upstream 47578 15330547 ~ 15331185 (-)
G91195 NA non-coding upstream 148669 15431638 ~ 15431863 (-)
G91198 NA non-coding upstream 179644 15462613 ~ 15462985 (-)
G91192 ptbp2,LOC107677274,LOC108268572,LOC107712817,LOC107590280 non-coding upstream 194431 15477400 ~ 15481252 (-)
G91206 NA non-coding upstream 235521 15518490 ~ 15518716 (-)
LOC103022461 NA other downstream 151412 15124513 ~ 15130106 (-)
G90788 NA other downstream 1022562 14257955 ~ 14258956 (-)
LOC103029309 osbpl3,osbpl3b,LOC108441521,LOC107678127,LOC107550826,LOC107685532 other downstream 2146404 13021995 ~ 13135114 (-)
G90571 mpp6,LOC108267518,LOC108436535,LOC107596657,LOC107749029 other downstream 2314227 12950612 ~ 12967291 (-)
LOC103038102 iqgap3,LOC106605450,LOC105031059,LOC105908924 other downstream 2538301 12720969 ~ 12743217 (-)
G91187 NA other upstream 40331 15323300 ~ 15324097 (-)
G91208 NA other upstream 476992 15759961 ~ 15766432 (-)
pomgnt2 pomgnt2,LOC107657577,LOC107732433,LOC107551215,LOC107751881,LOC107704096,LOC107601673 other upstream 891984 16174953 ~ 16191275 (-)
LOC103036883 NA other upstream 1465953 16748922 ~ 16761761 (-)
G91479 NA other upstream 1803276 17086245 ~ 17089037 (-)

Expression


Co-expression Network