G46267


Basic Information

Item Value
gene id G46267
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 9102035 ~ 9102456 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU52617
AAAACGAGGCACCATTATGTCAAAAGGAAATTTTTTTGCTGACTTTCTCATAATGATCTACTTTCTTTTTTTAGGGGTTGTTACAAATTGCTACAAGTTCCATTTGTGCACAGCGTGTGTGGTATAATATATAAAAGAAGTGAGCTTGAGCATTTGCTCTGGTTATGTGAACTTGCCTCATCTTGCAATGCTCCACCTGGCCAAGTTTTATCCATTAAAATGTAGAAAATCGTACAGCAAGCCACATTTAGTGCCAAGTATACTGGTTCGCCCCACTGCAGTCCACTCCCTTTTCCGGCCCTGATCCACATTCTCTCCATTAGCCTCATTGATGGATTCTGGCAAGGAAACTTTTCCTTGAGCTCCCCTTGAAGGACGTTCTGTTGTCCTGCTGGGCGTGTACTACCACCCTCAAACCACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52617 True 422 lncRNA 0.43 1 9102035 9102456

Neighbor

gene id symbol gene type direction distance location
CI01000006_09066050_09070383 BARH1, BARHL1B, BARHL1 coding upstream 31454 9065962 ~ 9070581 (+)
CI01000006_09004949_09014310 GSNA, GSN coding upstream 87446 9004674 ~ 9014589 (+)
CI01000006_08847431_08853895 NA coding upstream 248114 8846260 ~ 8853921 (+)
CI01000006_08757702_08765273 WDR5, WDR5B, WDR5.L, BRAFLDRAFT_281422 coding upstream 335973 8757419 ~ 8766062 (+)
CI01000006_08673737_08674685 NA coding upstream 426921 8673580 ~ 8675114 (+)
CI01000006_09105004_09106470 NA coding downstream 1759 9104215 ~ 9106963 (+)
CI01000006_09107491_09114820 GTF3C4 coding downstream 4370 9106826 ~ 9115071 (+)
CI01000006_09192219_09195918 NA coding downstream 89441 9191897 ~ 9195984 (+)
CI01000006_09320331_09321778 UB2G1, UBE2G1A, UBE2G1, UBE2G1B coding downstream 217875 9320331 ~ 9321778 (+)
CI01000006_09334843_09337295 FAM216A coding downstream 232345 9334801 ~ 9337403 (+)
G46256 NA non-coding upstream 6440 9095203 ~ 9095595 (+)
G46248 NA non-coding upstream 10576 9091251 ~ 9091459 (+)
G46246 NA non-coding upstream 11803 9090026 ~ 9090232 (+)
G45796 NA non-coding upstream 23373 9078441 ~ 9078662 (+)
G45787 NA non-coding upstream 47739 9053984 ~ 9054296 (+)
G46284 NA non-coding downstream 38974 9141430 ~ 9141660 (+)
G46288 NA non-coding downstream 45215 9147671 ~ 9147892 (+)
G46296 NA non-coding downstream 56121 9158577 ~ 9158906 (+)
G46316 NA non-coding downstream 87527 9189983 ~ 9197387 (+)
G46278 NA non-coding downstream 87906 9190362 ~ 9283895 (+)
G45416 NA other upstream 267338 8818814 ~ 8834697 (+)
G45355 NA other upstream 889647 8209555 ~ 8212388 (+)
CI01000006_08198328_08199463 NA other upstream 901890 8197881 ~ 8200145 (+)
G45336 NA other upstream 1080084 8019342 ~ 8021951 (+)
G45265 NA other upstream 1181680 7883867 ~ 7920355 (+)
G46652 NA other downstream 1054123 10156579 ~ 10159251 (+)
G47145 NA other downstream 1382902 10485358 ~ 10511806 (+)
G47159 NA other downstream 2313773 11416229 ~ 11521703 (+)
G47318 NA other downstream 2521811 11624267 ~ 11638252 (+)
G48094 NA other downstream 3175164 12277620 ~ 12279541 (+)

Expression


Co-expression Network